Evidence map›Paper›PMID 37917515›Full record

ArticleIEEE transactions on medical imaging2024

Surface-Based Probabilistic Fiber Tracking in Superficial White Matter.

Xinyu Nie, Jialiang Ruan, Maria Concepcion Garcia Otaduy, Lea Tenenholz Grinberg, John Ringman, Yonggang Shi

Open access · greenAbstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. GPU Accelerated Modeling of Cortical Radial and Tangential Connectivity Changes in Neurodegeneration.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2026
    Article
  3. Article
  4. Review
  5. Surface-based and Shape-informed U-fiber Atlasing for Robust Superficial White Matter Connectivity Analysis.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2024
    Article
  6. Imaging of the superficial white matter in health and disease.Imaging neuroscience (Cambridge, Mass.) · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Xinyu Nie
Jialiang Ruan
Maria Concepcion Garcia Otaduy
Lea Tenenholz Grinberg
John Ringman
Yonggang Shi
University of Southern California · USUniversidade de São Paulo · BRUniversity of California, San Francisco · US

Funding

USCADRC Diversity Supplement PachicanoP30AG066530 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HELENA Chang CHUI, ARTHUR W TOGA · 2020 to 2026
$27.8M
TR&D3: Intrinsic Surface MappingP41EB015922 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI VAN HORN, JOHN DARRELL · 2012 to 2022
$14.1M
Clinical Features and Neuropathological Basis of Sleep Wake Behavior in Alzheimer's and PSPR01AG060477 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Lea Tenenholz Grinberg, Thomas C Neylan · 2019 to 2026
$8.2M
Motor, Visual, and Olfactory Changes in Genetic Subtypes of Alzheimer’s DiseaseR01AG062007 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RINGMAN, JOHN M · 2019 to 2023
$4.1M
Surface-Based Fiber Tracking and Modeling Techniques for Mapping the Superficial White Matter Connectome with Diffusion MRIR01EB022744 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Yonggang Shi · 2016 to 2026
$3.7M
Imaging brain iron and protein aggregation with MRI for assessing Alzheimer's disease pathology and progressionR01AG070826 · NIA · UNIVERSITY OF CALIFORNIA BERKELEY · PI GRINBERG, LEA TENENHOLZ, LIU, CHUNLEI · 2021 to 2025
$3.3M
Brainstem connectomes related to Alzheimer's diseaseRF1AG056573 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SHI, YONGGANG · 2018 to 2018
$2.5M
Shape-based personalized AT(N) imaging markers of Alzheimer's diseaseRF1AG077578 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SHI, YONGGANG · 2023 to 2023
$2.2M
Tau-induced connectome imaging markers of Alzheimer's diseaseRF1AG064584 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SHI, YONGGANG · 2020 to 2020
$2.1M
Tau-associated pathological changes in reward networks for the prediction of neuropsychiatric symptoms in Alzheimer’s diseaseR21AG064776 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SHI, YONGGANG · 2019 to 2020
$444k
NIA NIH HHS P30 AG066530NIA NIH HHS R01 AG060477NIA NIH HHS R01 AG062007NIA NIH HHS R01 AG070826NIA NIH HHS R21 AG064776NIA NIH HHS RF1 AG056573NIA NIH HHS RF1 AG064584NIA NIH HHS RF1 AG077578NIBIB NIH HHS P41 EB015922NIBIB NIH HHS R01 EB022744
6 · The paper itself

Abstract

The short association fibers or U-fibers travel in the superficial white matter (SWM) beneath the cortical layer. While the U-fibers play a crucial role in various brain disorders, there is a lack of effective tools to reconstruct their highly curved trajectory from diffusion MRI (dMRI). In this work, we propose a novel surface-based framework for the probabilistic tracking of fibers on the triangular mesh representation of the SWM. By deriving a closed-form solution to transform the spherical harmonics (SPHARM) coefficients of 3D fiber orientation distributions (FODs) to local coordinate systems on each triangle, we develop a novel approach to project the FODs onto the tangent space of the SWM. After that, we utilize parallel transport to realize the intrinsic propagation of streamlines on SWM following probabilistically sampled fiber directions. Our intrinsic and surface-based method eliminates the need to perform the necessary but challenging sharp turns in 3D compared with conventional volume-based tractography methods. Using data from the Human Connectome Project (HCP), we performed quantitative comparisons to demonstrate the proposed algorithm can more effectively reconstruct the U-fibers connecting the precentral and postcentral gyrus than previous methods. Quantitative validations were then performed on post-mortem MRIs to show the reconstructed U-fibers from our method more faithfully follow the SWM than volume-based tractography. Finally, we applied our algorithm to study the parietal U-fiber connectivity changes in autosomal dominant Alzheimer's disease (ADAD) patients and successfully detected significant associations between U-fiber connectivity and disease severity.

Indexed as

ConnectomeWhite MatterBrainDiffusion Magnetic Resonance ImagingDiffusion Tensor ImagingHumansImage Processing, Computer-AssistedNerve Fibers

Identifiers

PMID37917515
PMCPMC10917128
OpenAlexW4388240272

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.