Evidence map›Paper›PMID 37917202›Full record

ArticleThe Journal of clinical investigation2024

CDKL5 regulates p62-mediated selective autophagy and confers protection against neurotropic viruses.

Josephine W Thinwa, Zhongju Zou, Emily Parks, Salwa Sebti, Kelvin Hui, Yongjie Wei, Mohammad Goodarzi, Vibha Singh, Greg Urquhart, Jenna L Jewell and 4 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. CMGC Kinases in Viral Infection and Human Disease.Pathogens (Basel, Switzerland) · 2026
    Review
  5. Review
  6. The Roles of SQSTM1/p62 in Selective Autophagy and Oncogenic Signaling.International journal of molecular sciences · 2026
    Review
  7. Role of autophagy in antiviral innate immunity.Cellular & molecular biology letters · 2026
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Josephine W ThinwaDepartment of Internal Medicine.
Zhongju ZouDepartment of Internal Medicine.
Emily ParksDepartment of Cell Biology, and.
Salwa SebtiDepartment of Internal Medicine.
Kelvin HuiHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Yongjie WeiCancer Research Institute, Guangzhou Medical University, Guangzhou, China.
Mohammad GoodarziDepartment of Immunology, and.
Vibha SinghDepartment of Immunology, and.
Greg UrquhartDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Jenna L JewellDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.
Julie K PfeifferDepartment of Microbiology.
Beth LevineDepartment of Internal Medicine.
Tiffany A ReeseDepartment of Microbiology.
Michael U ShilohDepartment of Internal Medicine.
The University of Texas Southwestern Medical Center · USGuangzhou Medical University Cancer Hospital · CNHoward Hughes Medical Institute · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Sandi Leigh Pruitt · 2010 to 2026
$53.7M
RP5: Chemical proteomic discovery of small-molecule probes for autophagy proteinsU19AI142784 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI SHILOH, MICHAEL · 2019 to 2023
$36.9M
UT GASTROENTEROLOGY/HEPATOLOGY RESEARCH TRAINING PROGRAMT32DK007745 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Rodney E Infante · 1997 to 2026
$6.8M
Defining Mechanisms for Parasite-Driven Effects on Gamma-Herpesvirus LatencyR01AI130020 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Tiffany Anne Reese · 2018 to 2026
$3.7M
Characterization of CDKL5 function in host antiviral defenseK08AI163377 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI THINWA, JOSEPHINE WANJIRU · 2021 to 2025
$983k
NCI NIH HHS P30 CA016672NCI NIH HHS P30 CA142543NIAID NIH HHS K08 AI163377NIAID NIH HHS R01 AI130020NIAID NIH HHS U19 AI142784NIDDK NIH HHS T32 DK007745
6 · The paper itself

Abstract

Virophagy, the selective autophagosomal engulfment and lysosomal degradation of viral components, is crucial for neuronal cell survival and antiviral immunity. However, the mechanisms leading to viral antigen recognition and capture by autophagic machinery remain poorly understood. Here, we identified cyclin-dependent kinase-like 5 (CDKL5), known to function in neurodevelopment, as an essential regulator of virophagy. Loss-of-function mutations in CDKL5 are associated with a severe neurodevelopmental encephalopathy. We found that deletion of CDKL5 or expression of a clinically relevant pathogenic mutant of CDKL5 reduced virophagy of Sindbis virus (SINV), a neurotropic RNA virus, and increased intracellular accumulation of SINV capsid protein aggregates and cellular cytotoxicity. Cdkl5-knockout mice displayed increased viral antigen accumulation and neuronal cell death after SINV infection and enhanced lethality after infection with several neurotropic viruses. Mechanistic studies demonstrated that CDKL5 directly binds the canonical selective autophagy receptor p62 and phosphorylates p62 at T269/S272 to promote its interaction with viral capsid aggregates. We found that CDKL5-mediated phosphorylation of p62 facilitated the formation of large p62 inclusion bodies that captured viral capsids to initiate capsid targeting to autophagic machinery. Overall, these findings identify a cell-autonomous innate immune mechanism for autophagy activation to clear intracellular toxic viral protein aggregates during infection.

Indexed as

Protein AggregatesVirusesAnimalsAntigens, ViralAutophagyCapsid ProteinsMiceMice, KnockoutPhosphorylationProtein Serine-Threonine KinasesAntigens, ViralCapsid ProteinsCDKL5 protein, mouseProtein AggregatesProtein Serine-Threonine KinasesAutophagyCellular immune responseInfectious diseaseInnate immunityVirology

Identifiers

PMID37917202
PMCPMC10760973
OpenAlexW4388220176

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.