Evidence map›Paper›PMID 37915799›Full record

ArticleFrontiers in psychiatry2023

A whole exome sequencing study to identify rare variants in multiplex families with alcohol use disorder.

Shirley Y Hill, Joseph Hostyk

Open access · goldAbstract read
In one paragraph

Article in Frontiers in psychiatry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
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  8. Article
  9. Human genetics and epigenetics of alcohol use disorder.The Journal of clinical investigation · 2024
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Shirley Y HillDepartment of Psychiatry, Psychology and Human Genetics, University of Pittsburgh, Pittsburgh, PA, United States.
Joseph HostykInstitute for Genomic Medicine, Columbia University, New York, NY, United States.
Columbia University · USUniversity of Pittsburgh · US

Funding

BIOLOGICAL RISK FACTORS IN RELATIVES OF ALCOHOLIC WOMENR01AA008082 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HILL, SHIRLEY · 1990 to 2014
$7.6M
COGNITIVE/PERSONALITY FACTORS IN RELATIVES OF ALCOHOLICSR01AA005909 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HILL, SHIRLEY Y. · 1985 to 2006
$5.4M
Longitudinal Predictors of Alcohol Dependence in Offspring of Multiplex FamiliesR01AA018289 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HILL, SHIRLEY · 2009 to 2013
$3.3M
Next Generation Rare Variant Discovery in Multiplex AD FamiliesR01AA021746 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOLDSTEIN, DAVID B., HILL, SHIRLEY · 2015 to 2020
$2.1M
NIAAA NIH HHS R01 AA005909NIAAA NIH HHS R01 AA008082NIAAA NIH HHS R01 AA018289NIAAA NIH HHS R01 AA021746
6 · The paper itself

Abstract

Background: Alcohol use disorder (AUD) runs in families and is accompanied by genetic variation. Some families exhibit an extreme susceptibility in which multiple cases are found and often with an early onset of the disorder. Large scale genome-wide association studies have identified several genes with impressive statistical probabilities. Most of these genes are common variants. Our goal was to perform exome sequencing in families characterized by multiple cases (multiplex families) to determine if rare variants might be segregating with disease status. Methods: A case-control approach was used to leverage the power of a large control sample of unrelated individuals ( Results: We searched 18,666 protein coding genes to identify an excess of rare deleterious genetic variation using whole exome sequence data in the 53 AUD individuals from a total of 282 family members. To complete a case/control analysis of unrelated individuals, probands were compared to unrelated controls. Case enrichment for 16 genes with significance at 10 Conclusion: This study implicates ultra-rare loss-of-function genes in AUD cases. Among the genes identified include those previously reported for nicotine and alcohol dependence (

Indexed as

alcohol use disorderexomemultiplex familiesrare variantssubstance use disorder

Identifiers

PMID37915799
PMCPMC10616827
OpenAlexW4387704068

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.