Evidence map›Paper›PMID 37915431›Full record

ArticleApplications in plant sciences

A pipeline for the rapid collection of color data from photographs.

Yvonne Luong, Ariel Gasca-Herrera, Tracy M Misiewicz, Benjamin E Carter

Abstract read
In one paragraph

Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yvonne LuongBiological Sciences San Jose State University San Jose, California 95192 USA.
Ariel Gasca-HerreraBiological Sciences San Jose State University San Jose, California 95192 USA.
Tracy M MisiewiczUniversity and Jepson Herbaria University of California Berkeley, California 94720 USA.ORCID 0000-0002-2683-8405
Benjamin E CarterBiological Sciences San Jose State University San Jose, California 95192 USA.ORCID 0000-0002-6473-3866

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Premise: There are relatively few studies of flower color at landscape scales that can address the relative importance of competing mechanisms (e.g., biotic: pollinators; abiotic: ultraviolet radiation, drought stress) at landscape scales. Methods: We developed an R shiny pipeline to sample color from images that were automatically downloaded using query results from a search using iNaturalist or the Global Biodiversity Information Facility (GBIF). The pipeline was used to sample ca. 4800 North American wallflower ( Results: Flower color was strongly non-randomly distributed spatially, but did not correlate strongly with climate, with most of the variation explained instead by spatial autocorrelation. However, finer-scale patterns including local correlations between elevation and color were observed. Analyses using color-calibrated and raw images revealed similar results. Discussion: This pipeline provides users the ability to rapidly capture color data from iNaturalist images and can be a useful tool in detecting spatial or temporal changes in color using citizen science data.

Indexed as

biogeographycitizen sciencedigital photographsErysimumflower coloriNaturalistR shiny

Identifiers

PMID37915431
PMCPMC10617320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.