Evidence map›Paper›PMID 37914906›Full record

ArticleCommunications biology2023

Dimeric Transmembrane Structure of the SARS-CoV-2 E Protein.

Rongfu Zhang, Huajun Qin, Ramesh Prasad, Riqiang Fu, Huan-Xiang Zhou, Timothy A Cross

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Journal of the American Chemical Society · 2025
    Article
  6. bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Article
  9. Article
  10. Structural proteins of human coronaviruses: what makes them different?Frontiers in cellular and infection microbiology · 2024
    Review
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Rongfu Zhang *Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306, USA.
Huajun Qin *Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306, USA.
Ramesh PrasadDepartment of Chemistry, University of Illinois Chicago, Chicago, IL, 60607, USA.ORCID 0000-0001-9184-779X
Riqiang FuNational High Magnetic Field Laboratory, Tallahassee, FL, 32310, USA.ORCID 0000-0003-0075-0410
Huan-Xiang ZhouDepartment of Chemistry, University of Illinois Chicago, Chicago, IL, 60607, USA. hzhou43@uic.edu.ORCID 0000-0001-9020-0302
Timothy A CrossDepartment of Chemistry and Biochemistry, Florida State University, Tallahassee, FL, 32306, USA. timothyacross@gmail.com.ORCID 0000-0002-9413-0505
Florida State University · USUniversity of Illinois Chicago · USNational High Magnetic Field Laboratory · US

Funding

TR&D3-SCHP41GM122698 · NIGMS · FLORIDA STATE UNIVERSITY · PI BREY, WILLIAM W, CROSS, TIMOTHY A · 2017 to 2021
$6.7M
Quantitative, Mechanistic Studies of Biomolecular RecognitionR35GM118091 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Huan-Xiang Zhou · 2016 to 2026
$6.5M
Membrane Protein Structures and Interactions in the M. tuberculosis DivisomeR01AI119178 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 2015 to 2019
$3.6M
NIAID NIH HHS R01 AI119178NIGMS NIH HHS P41 GM122698NIGMS NIH HHS R35 GM118091
6 · The paper itself

Abstract

The SARS-CoV-2 E protein is a transmembrane (TM) protein with its N-terminus exposed on the external surface of the virus. At debate is its oligomeric state, let alone its function. Here, the TM structure of the E protein is characterized by oriented sample and magic angle spinning solid-state NMR in lipid bilayers and refined by molecular dynamics simulations. This protein was previously found to be a pentamer, with a hydrophobic pore that appears to function as an ion channel. We identify only a front-to-front, symmetric helix-helix interface, leading to a dimeric structure that does not support channel activity. The two helices have a tilt angle of only 6°, resulting in an extended interface dominated by Leu and Val sidechains. While residues Val14-Thr35 are almost all buried in the hydrophobic region of the membrane, Asn15 lines a water-filled pocket that potentially serves as a drug-binding site. The E and other viral proteins may adopt different oligomeric states to help perform multiple functions.

Indexed as

COVID-19SARS-CoV-2Amino Acid SequenceHumansMembrane ProteinsNuclear Magnetic Resonance, BiomolecularProtein Structure, SecondaryMembrane Proteins

Identifiers

PMID37914906
PMCPMC10620413
OpenAlexW4388128237

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.