Evidence map›Paper›PMID 37910612›Full record

ArticleScience advances2023

A telencephalon cell type atlas for goldfish reveals diversity in the evolution of spatial structure and cell types.

Muhammad Tibi, Stav Biton Hayun, Hannah Hochgerner, Zhige Lin, Shachar Givon, Osnat Ophir, Tal Shay, Thomas Mueller, Ronen Segev, Amit Zeisel

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

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  10. Single-Cell Profiling Uncovers Evolutionary Divergence of Hypocretin/Orexin Neuronal Subpopulations.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Muhammad TibiFaculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, 3200003 Haifa, Israel.ORCID 0000-0001-6017-3948
Stav Biton HayunDepartment of Biomedical Engineering, Ben-Gurion University of the Negev, 8410501 Beer Sheva, Israel.ORCID 0009-0000-5008-6007
Hannah HochgernerFaculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, 3200003 Haifa, Israel.ORCID 0000-0002-7739-666X
Zhige LinFaculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, 3200003 Haifa, Israel.
Shachar GivonDepartment of Life Sciences, Ben-Gurion University of the Negev, 8410501 Beer Sheva, Israel.ORCID 0000-0001-9181-4859
Osnat OphirFaculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, 3200003 Haifa, Israel.
Tal ShayDepartment of Life Sciences, Ben-Gurion University of the Negev, 8410501 Beer Sheva, Israel.ORCID 0000-0003-0755-1350
Thomas MuellerDepartment of Biology, Montclair State University, 1 Normal Avenue, Montclair, NJ 07043, USA.ORCID 0000-0001-9712-7451
Ronen SegevDepartment of Biomedical Engineering, Ben-Gurion University of the Negev, 8410501 Beer Sheva, Israel.ORCID 0000-0002-8109-1076
Amit ZeiselFaculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, 3200003 Haifa, Israel.ORCID 0000-0002-2424-9279
Technion – Israel Institute of Technology · ILBen-Gurion University of the Negev · ILMontclair State University · US

Funding

The role of prestimulus oscillatory brain dynamics in auditory memoryP20GM113109 · NIGMS · KANSAS STATE UNIVERSITY · PI Maria Magdalena Diehl · 2017 to 2026
$24.1M
NIGMS NIH HHS P20 GM113109
6 · The paper itself

Abstract

Teleost fish form the largest group of vertebrates and show a tremendous variety of adaptive behaviors, making them critically important for the study of brain evolution and cognition. The neural basis mediating these behaviors remains elusive. We performed a systematic comparative survey of the goldfish telencephalon. We mapped cell types using single-cell RNA sequencing and spatial transcriptomics, resulting in de novo molecular neuroanatomy parcellation. Glial cells were highly conserved across 450 million years of evolution separating mouse and goldfish, while neurons showed diversity and modularity in gene expression. Specifically, somatostatin interneurons, famously interspersed in the mammalian isocortex for local inhibitory input, were curiously aggregated in a single goldfish telencephalon nucleus but molecularly conserved. Cerebral nuclei including the striatum, a hub for motivated behavior in amniotes, had molecularly conserved goldfish homologs. We suggest elements of a hippocampal formation across the goldfish pallium. Last, aiding study of the teleostan everted telencephalon, we describe substantial molecular similarities between goldfish and zebrafish neuronal taxonomies.

Indexed as

GoldfishZebrafishAnimalsCerebral CortexHippocampusMammalsMiceNeurons

Identifiers

PMID37910612
PMCPMC10619943
OpenAlexW4388173953

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.