Evidence map›Paper›PMID 37909735›Full record

ArticleMicrobiology spectrum2023

Different lanthanide elements induce strong gene expression changes in a lanthanide-accumulating methylotroph.

Linda Gorniak, Julia Bechwar, Martin Westermann, Frank Steiniger, Carl-Eric Wegner

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  3. Article
  4. Modulating metal-centered dimerization of a lanthanide chaperone protein for separation of light lanthanides.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Linda GorniakInstitute of Biodiversity, Aquatic Geomicrobiology, Friedrich Schiller University , Jena, Germany.
Julia BechwarInstitute of Biodiversity, Aquatic Geomicrobiology, Friedrich Schiller University , Jena, Germany.
Martin WestermannElectron Microscopy Center, Jena University Hospital , Jena, Germany.
Frank SteinigerElectron Microscopy Center, Jena University Hospital , Jena, Germany.
Carl-Eric WegnerInstitute of Biodiversity, Aquatic Geomicrobiology, Friedrich Schiller University , Jena, Germany.ORCID 0000-0002-4339-6602
Friedrich Schiller University Jena · DEJena University Hospital · DE

Funding

Deutsche Forschungsgemeinschaft (DFG) open access oublishing project number 512648189Deutsche Forschungsgemeinschaft (DFG) SFB 1127 ChemBioSys project number 239748522Deutsche Forschungsgemeinschaft (DFG) WE6579/4-1
6 · The paper itself

Abstract

importanceSince its discovery, Ln-dependent metabolism in bacteria attracted a lot of attention due to its bio-metallurgical application potential regarding Ln recycling and circular economy. The physiological role of Ln is mostly studied dependent on presence and absence. Comparisons of how different (utilizable) Ln affect metabolism have rarely been done. We noticed unexpectedly pronounced changes in gene expression caused by different Ln supplementation. Our research suggests that strain RH AL1 distinguishes different Ln elements and that the effect of Ln reaches into many aspects of metabolism, for instance, chemotaxis, motility, and polyhydroxyalkanoate metabolism. Our findings regarding Ln accumulation suggest a distinction between individual Ln elements and provide insights relating to intracellular Ln homeostasis. Understanding comprehensively how microbes distinguish and handle different Ln elements is key for turning knowledge into application regarding Ln-centered biometallurgy.

Indexed as

Lanthanoid Series ElementsBacteriaGene ExpressionLanthanoid Series ElementsEDXFFTEMlanthanideslanthanomemethylotrophyRNAseqTEM

Identifiers

PMID37909735
PMCPMC10848612
OpenAlexW4388128151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.