Evidence map›Paper›PMID 37908783›Full record

ArticleInfection and drug resistance2023

Daniel Mekonnen, Abaineh Munshea, Endalkachew Nibret, Bethlehem Adnew, Hailu Getachew, Amiro Kebede, Ananya Gebrewahid, Silvia Herrera-Leon, Aranzazu Amor Aramendia, Agustín Benito and 4 more

Abstract read
In one paragraph

Article in Infection and drug resistance, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Rifampicin-resistantJournal of clinical tuberculosis and other mycobacterial diseases · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Phenotypic and Genotypic Drug Resistance ofPathogens (Basel, Switzerland) · 2024
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Daniel MekonnenDepartment of Medical Laboratory Sciences, School of Health Science, College of Medicine and Health Sciences, Bahir Dar University, Bahir Dar, Ethiopia.ORCID 0000-0002-8220-3850
Abaineh MunsheaHealth Biotechnology Division, Institute of Biotechnology, Bahir Dar University, Bahir Dar, Ethiopia.
Endalkachew NibretHealth Biotechnology Division, Institute of Biotechnology, Bahir Dar University, Bahir Dar, Ethiopia.ORCID 0000-0002-7063-2877
Bethlehem AdnewArmauer Hansen Research Institute, Addis Ababa, Ethiopia.
Hailu GetachewAmhara Public Health Institute, Bahir Dar, Ethiopia.
Amiro KebedeAmhara Public Health Institute, Bahir Dar, Ethiopia.
Ananya GebrewahidAmhara Public Health Institute, Bahir Dar, Ethiopia.
Silvia Herrera-LeonNational Centre for Microbiology, Instituto de Salud Carlos III, Madrid, Spain.
Aranzazu Amor AramendiaFundación Mundo Sano, Madrid, Spain.ORCID 0000-0001-8576-9051
Agustín BenitoNational Center of Tropical Medicine, Institute of Health Carlos III, Centro de Investigación Biomédica En Red de Enfermedades Infecciosas, Madrid, Spain.
Estefanía AbascalNational Centre for Microbiology, Instituto de Salud Carlos III, Madrid, Spain.
Camille JacquelineNational Centre for Microbiology, Instituto de Salud Carlos III, Madrid, Spain.
Abraham AseffaArmauer Hansen Research Institute, Addis Ababa, Ethiopia.ORCID 0000-0002-8028-1150
Laura Herrera-LeonNational Centre for Microbiology, Instituto de Salud Carlos III, Madrid, Spain.

Funding

Ethiopia-Emory TB Research Training ProgramD43TW009127 · FIC · EMORY UNIVERSITY · PI HENRY M BLUMBERG, Kidist Bobosha · 2013 to 2026
$3.4M
FIC NIH HHS D43 TW009127
6 · The paper itself

Abstract

Introduction: Drug resistance (DR) in Methods: A facility-based cross-sectional study was conducted in 2020-2022 among new and presumptive multidrug resistant-TB (MDR-TB) cases in Northwest Ethiopia. Whole-genome sequencing (WGS) was performed on 161 isolates using Illumina NovaSeq 6000 technology. The SNP mutations associated with drug resistance were identified using MtbSeq and TB profiler Bioinformatics softwares. Results: Of the 146 Mtb isolates that were successfully genotyped, 20 (13.7%) harbored one or more resistance-associated SNPs. L4.2.2.ETH was the leading drug-resistant sub-lineage, accounting for 10/20 (50%) of the resistant Mtb. MDR-TB isolates showed extensive mutations against first-line anti-TB drugs. Ser450Leu/(tcg/tTg) for Rifampicin (RIF), Ser315Thr/(agc/aCc) for Isoniazid (INH), Met306Ile/(atg/atA(C)) for Ethambutol (EMB), and Gly69Asp for Streptomycin (STR) were the leading resistance associated mutations which accounted for 56.5%, 89.5%, 47%, and 29.4%, respectively. The presence of both clustered and non-clustered drug resistance (DR) isolates indicated that the epidemics is driven by both new DR development and acquired resistance. Conclusion: The high prevalence of drug-resistant TB due to geographically restricted sub-lineages (L4.2.2.ETH) indicates the ongoing local micro epidemics. The Mtb drug resistance surveillance system must be improved. Further evolutionary analysis of L4.2.2.ETH strain is highly desirable to understand evolutionary forces that leads L4.2.2.ETH in to high level DR and transmissible sub-lineage.

Indexed as

drug resistanceEthiopiaL.4.2.2Mycobacterium tuberculosisSIT149

Identifiers

PMID37908783
PMCPMC10614653

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.