Evidence map›Paper›PMID 37898820›Full record

ArticleCell & bioscience2023

IK is essentially involved in ciliogenesis as an upstream regulator of oral-facial-digital syndrome ciliopathy gene, ofd1.

Hye In Ka, Mina Cho, Seung-Hae Kwon, Se Hwan Mun, Sora Han, Min Jung Kim, Young Yang

Open access · goldAbstract read
In one paragraph

Article in Cell & bioscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. A Novel Pathogenic Splicing Mutation ofPharmacogenomics and personalized medicine · 2025
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hye In KaResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea.
Mina ChoResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea.
Seung-Hae KwonSeoul Center, Korea Basic Science Institute, Seoul, 02841, South Korea.
Se Hwan MunResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea.
Sora HanResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea.
Min Jung KimResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea. minkim@sookmyung.ac.kr.
Young YangResearch Institute of Women's Health, Sookmyung Women's University, Seoul, 04312, South Korea. yyang@sookmyung.ac.kr.ORCID http://orcid.org/0000-0003-4239-0804
Sookmyung Women's University · KRKorea Basic Science Institute · KR

Funding

Ministry of Education 2021R1A2C3003414Ministry of Education 2021R1A6A1A03038890Ministry of Education 2021R1A6C101A564Ministry of Education 2021R1I1A1A01060442Ministry of Education 2022R1F1A1074668
6 · The paper itself

Abstract

backgroundThe cilia are microtubule-based organelles that protrude from the cell surface. Abnormalities in cilia result in various ciliopathies, including polycystic kidney disease (PKD), Bardet-Biedl syndrome (BBS), and oral-facial-digital syndrome type I (OFD1), which show genetic defects associated with cilia formation. Although an increasing number of human diseases is attributed to ciliary defects, the functions or regulatory mechanisms of several ciliopathy genes remain unclear. Because multi ciliated cells (MCCs) are especially deep in vivo, studying ciliogenesis is challenging. Here, we demonstrate that ik is essential for ciliogenesis in vivo.

resultsIn the absence of ik, zebrafish embryos showed various ciliopathy phenotypes, such as body curvature, abnormal otoliths, and cyst formation in the kidney. RNA sequencing analysis revealed that ik positively regulated ofd1 expression required for cilium assembly. In fact, depletion of ik resulted in the downregulation of ofd1 expression with ciliary defects, and these ciliary defects in ik mutants were rescued by restoring ofd1 expression. Interestingly, ik affected ciliogenesis particularly in the proximal tubule but not in the distal tubule in the kidney.

conclusionsThis study demonstrates the role of ik in ciliogenesis in vivo for the first time. Loss of ik in zebrafish embryos displays various ciliopathy phenotypes with abnormal ciliary morphology in ciliary tissues. Our findings on the ik-ofd1 axis provide new insights into the biological function of ik in clinical ciliopathy studies in humans.

Indexed as

CiliogenesisCiliopathyIKOFD1Oral-facial-digital syndrome

Identifiers

PMID37898820
PMCPMC10612314
OpenAlexW4388001360

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.