Evidence map›Paper›PMID 37898658›Full record

ArticleCommunications chemistry2023

Cryo-EM structure of human PAPP-A2 and mechanism of substrate recognition.

Janani Sridar, Amirhossein Mafi, Russell A Judge, Jun Xu, Kailyn A Kong, John C K Wang, Vincent S Stoll, Georgios Koukos, Reyna J Simon, Dan Eaton and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Janani Sridar *Calico Life Sciences LLC, South San Francisco, CA, 94080, USA.
Amirhossein Mafi *Calico Life Sciences LLC, South San Francisco, CA, 94080, USA.
Russell A JudgeAbbVie, 1 North Waukegan Rd, North Chicago, IL, 60064, USA.ORCID http://orcid.org/0000-0001-5917-9269
Jun XuCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.
Kailyn A KongCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.
John C K WangCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0003-0541-5427
Vincent S StollAbbVie, 1 North Waukegan Rd, North Chicago, IL, 60064, USA.
Georgios KoukosCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0002-9470-0651
Reyna J SimonCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.
Dan EatonCalico Life Sciences LLC, South San Francisco, CA, 94080, USA.ORCID http://orcid.org/0000-0003-3933-0958
Matthew BratkowskiCalico Life Sciences LLC, South San Francisco, CA, 94080, USA. mbratkowski@calicolabs.com.ORCID http://orcid.org/0000-0003-3911-0533
Qi HaoCalico Life Sciences LLC, South San Francisco, CA, 94080, USA. qhao@calicolabs.com.ORCID http://orcid.org/0000-0001-6246-2153
AbbVie (United States) · USISCO International (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pregnancy-Associated Plasma Protein A isoforms, PAPP-A and PAPP-A2, are metalloproteases that cleave insulin-like growth factor binding proteins (IGFBPs) to modulate insulin-like growth factor signaling. The structures of homodimeric PAPP-A in complex with IGFBP5 anchor peptide, and inhibitor proteins STC2 and proMBP have been recently reported. Here, we present the single-particle cryo-EM structure of the monomeric, N-terminal LG, MP, and the M1 domains (with the exception of LNR1/2) of human PAPP-A2 to 3.13 Å resolution. Our structure together with functional studies provides insight into a previously reported patient mutation that inactivates PAPP-A2 in a distal region of the protein. Using a combinational approach, we suggest that PAPP-A2 recognizes IGFBP5 in a similar manner as PAPP-A and show that PAPP-A2 cleaves IGFBP5 less efficiently due to differences in the M2 domain. Overall, our studies characterize the cleavage mechanism of IGFBP5 by PAPP-A2 and shed light onto key differences with its paralog PAPP-A.

Identifiers

PMID37898658
PMCPMC10613257
OpenAlexW4388033191

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.