Evidence map›Paper›PMID 37896814›Full record

ArticleViruses2023

Minor Variants of Orf1a, p33, and p23 Genes of VT Strain Citrus Tristeza Virus Isolates Show Symptomless Reactions on Sour Orange and Prevent Superinfection of Severe VT Isolates.

Grazia Licciardello, Giuseppe Scuderi, Marcella Russo, Marina Bazzano, Moshe Bar-Joseph, Antonino F Catara

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Grazia LicciardelloCREA-Council for Agricultural Research and Economics, Research Centre for Olive, Citrus and Tree Fruit, 95024 Acireale, Italy.ORCID 0000-0002-2846-9009
Giuseppe ScuderiAgrobiotech Soc. Coop. z.i. Blocco Palma I, Stradale Lancia 57, 95121 Catania, Italy.ORCID 0009-0003-5358-7853
Marcella RussoAgrobiotech Soc. Coop. z.i. Blocco Palma I, Stradale Lancia 57, 95121 Catania, Italy.
Marina BazzanoAgrobiotech Soc. Coop. z.i. Blocco Palma I, Stradale Lancia 57, 95121 Catania, Italy.
Moshe Bar-JosephThe S. Tolkowsky Laboratory, Department of Plant Pathology, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel.
Antonino F CataraFormerly, Department of Phytosanitary Science and Technologies, University of Catania, 95123 Catania, Italy.ORCID 0000-0001-6551-203X
Agricultural Research Organization · ILUniversity of Catania · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The control of tristeza quick decline (QD) of citrus is based on the use of rootstocks that are tolerant or resistant to the Citrus tristeza virus (CTV), but some of them show bio-agronomic limits. The application of cross-protection (CP) has been insufficiently explored. The present study examined the possibility of QD control by cross-protection (CP) following reports showing the dependence of the CP strategy on the close genetic relationships between the protective and challenging CTV isolates. Taking advantage of deep sequencing technologies, we located six naturally infected trees harboring no-seedling yellow (no-SY) and no QD decline (mild) VT isolates and used these for challenge inoculation with three QD VT isolates. Symptom monitoring showed that all six Sicilian mild no-SY isolates, based on their genomic relatedness and mild symptoms reactions, provide effective protection against the three severe local VT isolates. The differences between the six mild and three severe isolates were confined to just a few nucleotide variations conserved in eight positions of three CTV genes (p23, p33, and Orf1a). These results confirm that the superinfection exclusion (SIE mechanism) depends on close genetic relatedness between the protective and challenging severe VT strain isolates. Ten years of investigation suggest that CP could turn into an efficient strategy to contain CTV QD infections of sweet orange trees on SO rootstock.

Indexed as

CitrusClosterovirusSuperinfectionGenome, ViralPlant Diseasescross-protectiongenome sequencingquick declinesuperinfection exclusion

Identifiers

PMID37896814
PMCPMC10612028
OpenAlexW4387234898

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.