Evidence map›Paper›PMID 37896095›Full record

ArticlePlants (Basel, Switzerland)2023

Genetic Variability in Seed Longevity and Germination Traits in a Tomato MAGIC Population in Contrasting Environments.

Elise Bizouerne, Joseph Ly Vu, Benoît Ly Vu, Isidore Diouf, Frédérique Bitton, Mathilde Causse, Jérôme Verdier, Julia Buitink, Olivier Leprince

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Elise BizouerneInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.
Joseph Ly VuInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.
Benoît Ly VuInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.
Isidore DioufGénétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, INRAE, UR1052, CS60094, 84143 Avignon, France.
Frédérique BittonGénétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, INRAE, UR1052, CS60094, 84143 Avignon, France.
Mathilde CausseGénétique et Amélioration des Fruits et Légumes, Centre de Recherche PACA, INRAE, UR1052, CS60094, 84143 Avignon, France.ORCID 0000-0002-0407-4985
Jérôme VerdierInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.ORCID 0000-0003-3039-2159
Julia BuitinkInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.ORCID 0000-0002-1457-764X
Olivier LeprinceInstitut Agro, INRAE, University Angers, IRHS, SFR QUASAV, 49000 Angers, France.ORCID 0000-0003-1414-8690
Institut Agro Rennes-Angers · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FR

Funding

Région Pays-de-la-Loire Objectif végétal: Research, Education and Innovation in Pays de la Loire
6 · The paper itself

Abstract

The stable production of high vigorous seeds is pivotal to crop yield. Also, a high longevity is essential to avoid progressive loss of seed vigour during storage. Both seed traits are strongly influenced by the environment during seed development. Here, we investigated the impact of heat stress (HS) during fruit ripening on tomato seed lifespan during storage at moderate relative humidity, speed (t50) and homogeneity of germination, using a MAGIC population that was produced under optimal and HS conditions. A plasticity index was used to assess the extent of the impact of HS for each trait. HS reduced the average longevity and germination homogeneity by 50% within the parents and MAGIC population. However, there was a high genetic variability in the seed response to heat stress. A total of 39 QTLs were identified, including six longevity QTLs for seeds from control (3) and HS (3) conditions, and six plasticity QTLs for longevity, with only one overlapping with a longevity QTL under HS. Four out of the six longevity QTL co-located with t50 QTL, revealing hotspots for seed quality traits. Twenty-one QTLs with intervals below 3 cM were analyzed using previous transcriptome and gene network data to propose candidate genes for seed vigour and longevity traits.

Indexed as

ageinggerminationheat stresslongevitymultiparental populationphenotypic plasticityQTLSolanum lycopersicon

Identifiers

PMID37896095
PMCPMC10610530
OpenAlexW4387806592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.