Evidence map›Paper›PMID 37895382›Full record

ArticleLife (Basel, Switzerland)2023

Development of Sensitive Methods for the Detection of Minimum Concentrations of DNA on Martian Soil Simulants.

Yongda Li, Keith D Rochfort, David Collins, Konstantinos Grintzalis

Abstract read
In one paragraph

Article in Life (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Special Issue: 'Advances in Space Biology'.Life (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yongda LiSchool of Biotechnology, Dublin City University, D09 Y5NO Dublin, Ireland.
Keith D RochfortSchool of Nursing, Psychotherapy, and Community Health, Dublin City University, D09 Y5NO Dublin, Ireland.ORCID 0000-0003-1198-5952
David CollinsSchool of Biotechnology, Dublin City University, D09 Y5NO Dublin, Ireland.ORCID 0000-0003-2274-0889
Konstantinos GrintzalisSchool of Biotechnology, Dublin City University, D09 Y5NO Dublin, Ireland.ORCID 0000-0002-6276-495X

Funding

Irish Research Council GOIPG/2019/2945 Development and application of methods for planetary research
6 · The paper itself

Abstract

Several methods used for the quantification of DNA are based on UV absorbance or the fluorescence of complexes with intercalator dyes. Most of these intercalators are used in gels to visualize DNA and its structural integrity. Due to many extraterrestrial samples, such as meteorites or comets, which are likely to contain very small amounts of biological material, and because the ability to detect this material is crucial for understanding the origin and evolution of life in the universe, the development of assays that can detect DNA at low limits and withstand the rigors of space exploration is a pressing need in the field of astrobiology. In this study, we present a comparison of optimized protocols used for the fast and accurate quantification of DNA using common intercalator dyes. The sensitivity of assays exceeded that generated by any commercial kit and allowed for the accurate quantification of minimum concentrations of DNA. The methods were successful when applied to the detection and measurement of DNA spiked on soil samples. Furthermore, the impact of UV radiation as a harsh condition on the surface of Mars was assessed by DNA degradation and this was also confirmed by gel electrophoresis. Overall, the methods described provide economical, simple-step, and efficient approaches for the detection of DNA and can be used in future planetary exploration missions as tests used for the extraction of nucleic acid biosignatures.

Indexed as

assaysbiosignaturesDNAHoechstintercalatorsMartian simulantsNovelJuicequantificationSYBRGreen

Identifiers

PMID37895382
PMCPMC10608431

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.