Evidence map›Paper›PMID 37895200›Full record

ArticleGenes2023

Molecular Characterization of Complete Genome Sequence of an Avian Coronavirus Identified in a Backyard Chicken from Tanzania.

Henry M Kariithi, Jeremy D Volkening, Gaspar H Chiwanga, Iryna V Goraichuk, Peter L M Msoffe, David L Suarez

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Henry M KariithiExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, USDA, Athens, GA 30605, USA.ORCID 0000-0002-9250-9108
Jeremy D VolkeningBASE2BIO, Oshkosh, WI 54904, USA.ORCID 0000-0002-8892-7155
Gaspar H ChiwangaTanzania Veterinary Laboratory Agency, South Zone, Mtwara P.O. Box 186, Tanzania.
Iryna V GoraichukExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, USDA, Athens, GA 30605, USA.ORCID 0000-0002-5841-5765
Peter L M MsoffeDepartment of Veterinary Medicine and Public Health, Sokoine University of Agriculture, Chuo Kikuu, Morogoro P.O. Box 3021, Tanzania.
David L SuarezExotic and Emerging Avian Viral Diseases Research Unit, Southeast Poultry Research Laboratory, U.S. National Poultry Research Center, Agricultural Research Service, USDA, Athens, GA 30605, USA.ORCID 0000-0003-4582-6116
Agricultural Research Service · USOshkosh (United States) · USSokoine University of Agriculture · TZTanzania National Parks · TZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A complete genome sequence of an avian coronavirus (AvCoV; 27,663 bp excluding 3' poly(A) tail) was determined using nontargeted next-generation sequencing (NGS) of an oropharyngeal swab from a backyard chicken in a live bird market in Arusha, Tanzania. The open reading frames (ORFs) of the Tanzanian strain TZ/CA127/19 are organized as typical of gammaCoVs (

Indexed as

Coronavirus InfectionsGammacoronavirusInfectious bronchitis virusAnimalsChickensGenome, ViralTanzaniaAvCoVlineage GI-19LX4/QX-type IBVoropharyngeal swabrecombination

Identifiers

PMID37895200
PMCPMC10606662
OpenAlexW4386996570

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.