Evidence map›Paper›PMID 37894336›Full record

ArticleCancers2023

Osteosarcoma Multi-Omics Landscape and Subtypes.

Shan Tang, Ryan D Roberts, Lijun Cheng, Lang Li

Abstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Whole-Exome Analysis and Osteosarcoma: A Game Still Open.International journal of molecular sciences · 2024
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shan TangCollege of Pharmacy, The Ohio State University, Columbus, OH 43210, USA.ORCID 0000-0002-8224-2809
Ryan D RobertsDepartment of Pediatrics, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.ORCID 0000-0001-5028-744X
Lijun ChengDepartment of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH 43210, USA.ORCID 0000-0002-6336-5416
Lang LiCollege of Pharmacy, The Ohio State University, Columbus, OH 43210, USA.

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Daniel G. Stover · 1985 to 2026
$132.3M
Targeting cooperative mechanisms of metastatic colonization in osteosarcomaR01CA260178 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RYAN D. ROBERTS · 2022 to 2026
$2.2M
Elucidating and exploiting the mechanisms by which IL-6 and IL-8 facilitate osteosarcoma metastasisK08CA201638 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI ROBERTS, RYAN D. · 2016 to 2020
$815k
NCI NIH HHS K08 CA201638NCI NIH HHS P30 CA016058NCI NIH HHS R01 CA260178
6 · The paper itself

Abstract

Osteosarcoma (OS) is the most common primary bone malignancy that exhibits remarkable histologic diversity and genetic heterogeneity. The complex nature of osteosarcoma has confounded precise molecular categorization, prognosis, and prediction for this disease. In this study, we performed a comprehensive multiplatform analysis on 86 osteosarcoma tumors, including somatic copy-number alteration, gene expression and methylation, and identified three molecularly distinct and clinically relevant subtypes of osteosarcoma. The subgrouping criteria was validated on another cohort of osteosarcoma tumors. Previously unappreciated osteosarcoma-type-specific changes in specific genes' copy number, expression and methylation were revealed based on the subgrouping. The subgrouping and novel gene signatures provide insights into refining osteosarcoma therapy and relationships to other types of cancer.

Indexed as

bioinformaticsclinical outcomegene expressionmethylationmulti-omicsosteosarcomasomatic copy-number alteration

Identifiers

PMID37894336
PMCPMC10605601

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.