Evidence map›Paper›PMID 37894219›Full record

ArticleMicroorganisms2023

Identification and Characterization of ten

Rebecca L Lindsey, Arjun Prasad, Michael Feldgarden, Narjol Gonzalez-Escalona, Curtis Kapsak, William Klimke, Angela Melton-Celsa, Peyton Smith, Alexandre Souvorov, Jenny Truong and 1 more

Abstract read
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Genomic structure ofMicrobial genomics · 2026
    Article
  2. Article
  3. Article
  4. An outbreak of Shiga toxin-producingEpidemiology and infection · 2026
    Article
  5. Article
  6. Closed genome sequences of 39 Shiga toxin-producingMicrobiology resource announcements · 2025
    Article
  7. Investigation ofFoods (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Occurrence of MultipleMicroorganisms · 2025
    Article
  10. Article
  11. Epidemiology of Shiga toxin-producingJournal of medical microbiology · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rebecca L LindseyEnteric Diseases Laboratory Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.ORCID 0000-0002-2149-7971
Arjun PrasadNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.ORCID 0000-0002-1343-8664
Michael FeldgardenNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Narjol Gonzalez-EscalonaCenter for Food Safety and Applied Nutrition, Food and Drug Administration, College Park, MD 20740, USA.ORCID 0000-0003-4568-0022
Curtis KapsakEnteric Diseases Laboratory Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.ORCID 0000-0002-8735-1190
William KlimkeNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Angela Melton-CelsaDepartment of Microbiology and Immunology, School of Medicine, Uniformed Services University of the Health Sciences, Bethesda, MD 20184, USA.ORCID 0000-0002-3653-662X
Peyton SmithEnteric Diseases Laboratory Branch, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Alexandre SouvorovNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Jenny TruongOak Ridge Institute for Science and Education, Oak Ridge, TN 37830, USA.ORCID 0000-0003-2106-6968
Flemming ScheutzThe International Escherichia and Klebsiella Centre, Statens Serum Institut, 2300 Copenhagen, Denmark.ORCID 0000-0002-3931-4846

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sharing of genome sequences in online data repositories allows for large scale analyses of specific genes or gene families. This can result in the detection of novel gene subtypes as well as the development of improved detection methods. Here, we used publicly available WGS data to detect a novel Stx subtype, Stx2n in two clinical

Indexed as

genome sequenceShiga toxin-producing Escherichia coliShiga toxin subtypeStx2n

Identifiers

PMID37894219
PMCPMC10608928

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.