Evidence map›Paper›PMID 37891448›Full record

ArticleBiochemical genetics2024

Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes.

Rauf Ahmad Shah, Muzafar Riyaz, Savarimuthu Ignacimuthu, Kuppusamy Sivasankaran

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Article in Biochemical genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Rauf Ahmad ShahDivision of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, Tamil Nadu, 600034, India.ORCID http://orcid.org/0000-0003-3026-7083
Muzafar RiyazDivision of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, Tamil Nadu, 600034, India.ORCID http://orcid.org/0000-0001-9372-681X
Savarimuthu IgnacimuthuXavier Research Foundation, St. Xavier's College, Palayamkottai, Tamil Nadu, 627002, India.ORCID http://orcid.org/0000-0002-8467-789X
Kuppusamy SivasankaranDivision of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, Tamil Nadu, 600034, India. ganesh_swamy2005@yahoo.com.ORCID http://orcid.org/0000-0001-8957-231X

Funding

the Department of Science and Technology (DST)-Science and Engineering Research Board (SERB) EMR/2017/000566
6 · The paper itself

Abstract

In this study, the complete mitogenomes of Sympis rufibasis, Lacera noctilio, Oxyodes scrobiculata, Mocis undata, and Artena dotata were newly sequenced to bring up-to-date the database using the next-generation sequencing methods. The gene order of all sequenced mitogenomes was identical consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a non-coding A+T-rich region, which were common to other Lepidopteran insects. All protein-coding genes (PCGs) initiated with a canonical ATN codon and ended with TAN or an incomplete stop codon, single T. The A+T-rich region of S. rufibasis, L. noctilio, O. scrobiculata, M. undata, and A. dotata are 406 bp, 462 bp, 372 bp, 410 bp, and 406 bp long, respectively, containing number of characteristics that are distinctive to Noctuoidea moths. We analyzed concatenated amino acid sequences of protein-coding genes not including rRNAs, using Maximum Likelihood and Bayesian Inference methods. The phylogenetic analyses indicated that the tribe relationships within Erebinae were reconstructed as (Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini))))). Phylogenetic analyses supported and confirmed the monophyly of the subfamilies' relationships as follows: (Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae)))) within Erebidae.

Indexed as

Genome, MitochondrialPhylogenyAnimalsLepidopteraMothsBayesian inferenceErebinaeMaximum likelihood methodMitogenomesPhylogenetic implications

Identifiers

PMID37891448

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