Evidence map›Paper›PMID 37884654›Full record

ArticleNature plants2023

COG-imposed Golgi functional integrity determines the onset of dark-induced senescence.

Hee-Seung Choi, Marta Bjornson, Jiubo Liang, Jinzheng Wang, Haiyan Ke, Manhoi Hur, Amancio De Souza, Kavitha Satish Kumar, Jenny C Mortimer, Katayoon Dehesh

Abstract read
PubMed Publisher
In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
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  6. Trafficking and localization of Golgi-residentFrontiers in plant science · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Hee-Seung ChoiInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.ORCID http://orcid.org/0000-0003-4485-5919
Marta BjornsonDepartment of Plant Sciences, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0002-8275-4521
Jiubo LiangInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.ORCID http://orcid.org/0000-0001-7998-1312
Jinzheng WangInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.
Haiyan KeInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.
Manhoi HurInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.ORCID http://orcid.org/0000-0003-4278-3210
Amancio De SouzaInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.ORCID http://orcid.org/0000-0001-6447-3905
Kavitha Satish KumarLawrence Berkeley National Lab, Joint BioEnergy Institute, Emeryville, CA, USA.
Jenny C MortimerLawrence Berkeley National Lab, Joint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0000-0001-6624-636X
Katayoon DeheshInstitute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA, USA. kdehesh@ucr.edu.ORCID http://orcid.org/0000-0002-9312-8032
University of California, Riverside · USJoint BioEnergy Institute · USUniversity of California, Davis · USWine Australia · AU

Funding

Defining the Retrograde Plastid-to-Nucleus Stress Signaling PathwayR01GM107311 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DEHESH, KATAYOON · 2013 to 2021
$2.5M
NSF | BIO | Division of Molecular and Cellular Biosciences (MCB) 2104365U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM107311-8
6 · The paper itself

Abstract

Plant survival depends on dynamic stress-response pathways in changing environments. To uncover pathway components, we screened an ethyl methanesulfonate-mutagenized transgenic line containing a stress-inducible luciferase construct and isolated a constitutive expression mutant. The mutant is the result of an amino acid substitution in the seventh subunit of the hetero-octameric conserved oligomeric Golgi (COG) complex of Arabidopsis thaliana. Complementation studies verified the Golgi localization of cog7, and stress tests established accelerated dark-induced carbon deprivation/senescence of the mutant compared with wild-type plants. Multiomics and biochemical analyses revealed accelerated induction of protein ubiquitination and autophagy, and a counterintuitive increased protein N-glycosylation in senescencing cog7 relative to wild-type. A revertant screen using the overexpressor (FOX)-hunting system established partial, but notable rescue of cog7 phenotypes by COG5 overexpression, and conversely premature senescence in reduced COG5 expressing lines. These findings identify COG-imposed Golgi functional integrity as a main player in ensuring cellular survival under energy-limiting conditions.

Indexed as

Adaptor Proteins, Vesicular TransportGlycosylationAdaptor Proteins, Vesicular Transport

Identifiers

PMID37884654
OpenAlexW4387955619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.