ArticleNature communications2023
PH13 improves soybean shade traits and enhances yield for high-density planting at high latitudes.
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Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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29 citing papers in PubMed, 49 citations in OpenAlex.
- Structural variation in the IAMH2 3' UTR underlies hypocotyl elongation during light adaptation in Arabidopsis thaliana.The Plant journal : for cell and molecular biology · 2026Article
- Comparative evaluation of GWAS-prioritized SNP, SSR, and insertion-type structural variant marker panels for genomic prediction in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- A Shade Intensity Threshold Triggers Gibberellin Metabolic Reprogramming to Drive Shade Avoidance in Soybean.International journal of molecular sciences · 2026Article
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- Analysis of deep-resequencing data of 984 soybean accessions reveals structural variations underlying agronomic traits.Nature communications · 2026Article
- Shade Avoidance Restricts Soybean Breeding Progress and Increases Herbivore Susceptibility.Evolutionary applications · 2026Article
- Identification of Genes Associated with Seed Weight and Development of Functional Markers forBiology · 2026Article
- Plant Genetic Engineering: Technological Pathways, Application Scenarios, and Future Directions.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026Review
- Breeding Climate-Resilient Soybeans for 2050 and Beyond: Leveraging Novel Technologies to Mitigate Yield Stagnation and Climate Change Impacts.Plants (Basel, Switzerland) · 2026Review
- The current state of Japanese soybean breeding using DNA marker technology.Breeding science · 2026Article
- Molecular polymorphisms that underlie trait variation in crops: Lessons learned from soybean.The plant genome · 2026Review
- High-resolution quantitative trait loci mapping and pyramiding effects of candidate genes for plant height in soybean.The plant genome · 2026Article
- Regulatory Mechanisms Underlying Stem Strength and Toughness in Dicotyledonous Plants: Implications for Soybean Breeding.Current issues in molecular biology · 2026Review
- Toward a Green Revolution in soybean: The role of ultra-high-density planting.Journal of integrative plant biology · 2026Review
- Identification of genetic loci and domestication gene GmZFP1 associated with soybean hypocotyl elongation in seedling stage by genome-wide association study.BMC plant biology · 2026Article
- Genome-wide detection of superior haplotypes for seed oil and protein content in Northeast China soybean (Frontiers in plant science · 2026Article
- Leveraging GWAS-Identified Markers in Combination with Bayesian and Machine Learning Models to Improve Genomic Selection in Soybean.International journal of molecular sciences · 2025Article
- An automated in-field transport and imaging chamber system for high-throughput phenotyping of potted soybean.Plant methods · 2025Article
- CRISPR/Cas-Mediated Optimization of Soybean Shoot Architecture for Enhanced Yield.International journal of molecular sciences · 2025Review
- How Structural Variations Influence Crop Improvement.International journal of molecular sciences · 2025Review
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Authors and funding
31 authors at 15 institutions in 2 countries.
Chao Qin *State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Ying-Hui Li *State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Delin Li *State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.ORCID 0000-0002-3689-3790
Xueru ZhangDepartment of Statistics, Purdue University, West Lafayette, IN, 47907, USA.
Lingping KongGuangdong Key Laboratory of Plant Adaptation and Molecular Design, Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, Guangdong, 510006, China.ORCID 0000-0001-7787-0088
Yonggang ZhouSanya Nanfan Research Institute of Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, Hainan, 572025, China.
Xiangguang LyuState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Ronghuan JiState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Xiuzhi WeiState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Qican ChengState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zhiwei JiaLongping Biotechnology (Hainan) Co., Ltd, Yazhou-Bay Science and Technology City, Sanya, Hainan, 572025, China.
Xiaojiao LiLongping Biotechnology (Hainan) Co., Ltd, Yazhou-Bay Science and Technology City, Sanya, Hainan, 572025, China.
Qiang WangHeilongjiang Academy of Agricultural Sciences, Harbin, Heilongjiang, 150086, China.
Yueqiang WangJilin Academy of Agricultural Sciences, Changchun, Jilin, 130033, China.
Wen HuangTonghua Academy of Agricultural Sciences, Tonghua, Jilin, 135007, China.
Chunyan YangInstitute of Cereal and Oil Crops, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, Hebei, 050035, China.
Like LiuLiaocheng University, Liaocheng, Shandong, 252000, China.
Xing WangJiangsu Xuhuai Regional Institute of Agricultural Sciences, Xuzhou, Jiangsu, 221131, China.
Guangnan XingNanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
Guoyu HuAnhui Academy of Agricultural Sciences, Hefei, Anhui, 230041, China.
Zhihui ShanOil Crops Research Institute, Chinese Academy of Agriculture Sciences, Wuhan, Hubei, 430062, China.
Ruizhen WangCrops Research Institute, Jiangxi Academy of Agricultural Sciences, Nanchang, Jiangxi, 330200, China.
Haiyan LiSanya Nanfan Research Institute of Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, Hainan, 572025, China.
Hongyu LiState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Tao ZhaoState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Jun LiuState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yuping LuLongping Biotechnology (Hainan) Co., Ltd, Yazhou-Bay Science and Technology City, Sanya, Hainan, 572025, China.
Xiping HuBeidahuang KenFeng Seed Co., Ltd, Binxi Economic Development Zone, Harbin, Heilongjiang, 150090, China.
Fanjiang KongGuangdong Key Laboratory of Plant Adaptation and Molecular Design, Innovative Center of Molecular Genetics and Evolution, School of Life Sciences, Guangzhou University, Guangzhou, Guangdong, 510006, China. kongfj@gzhu.edu.cn.ORCID 0000-0001-7138-1478
Li-Juan QiuState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. qiulijuan@caas.cn.
Bin LiuState Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. liubin05@caas.cn.ORCID 0000-0002-5836-2333
Chinese Academy of Agricultural Sciences · CNHainan Agricultural School · CNHainan University · CNGuangzhou University · CNAnhui Academy of Agricultural Sciences · CNHebei Academy of Agriculture and Forestry Sciences · CNHeilongjiang Provincial Academy of Agricultural Sciences · CNJiangxi Academy of Agricultural Sciences · CNJilin Academy of Agricultural Sciences · CNJinhua Academy of Agricultural Sciences · CNLiaocheng University · CNNanjing Agricultural University · CNOil Crops Research Institute · CNPurdue University West Lafayette · USSweet Potato Research Institute · CN
Funding
No grant is acknowledged in the PubMed record.
Abstract
Shading in combination with extended photoperiods can cause exaggerated stem elongation (ESE) in soybean, leading to lodging and reduced yields when planted at high-density in high-latitude regions. However, the genetic basis of plant height in adaptation to these regions remains unclear. Here, through a genome-wide association study, we identify a plant height regulating gene on chromosome 13 (PH13) encoding a WD40 protein with three main haplotypes in natural populations. We find that an insertion of a Ty1/Copia-like retrotransposon in the haplotype 3 leads to a truncated PH13
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Genome-Wide Association StudyGlycine maxPhenotypePlant BreedingRetroelementsRetroelements
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