Evidence map›Paper›PMID 37884508›Full record

ArticleNature communications2023

Antibody-directed extracellular proximity biotinylation reveals that Contactin-1 regulates axo-axonic innervation of axon initial segments.

Yuki Ogawa, Brian C Lim, Shanu George, Juan A Oses-Prieto, Joshua M Rasband, Yael Eshed-Eisenbach, Hamdan Hamdan, Supna Nair, Francesco Boato, Elior Peles and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 40 citations in OpenAlex.

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  14. The Highly Localized Interaction between Neurofascin-186 and Gliomedin Promotes Subcellular Innervation by the Chandelier Cell.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
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  20. Hide-and-Seek genome editing reveals that Gephyrin is required for axo-axonic synapse assembly.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Yuki Ogawa *Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-2126-9087
Brian C Lim *Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Shanu GeorgeDivision of Neuroscience, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Juan A Oses-PrietoDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0003-4759-2341
Joshua M RasbandDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Yael Eshed-EisenbachDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Hamdan HamdanDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Supna NairDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.
Francesco BoatoDivision of Neuroscience, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID 0000-0001-9741-8021
Elior PelesDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-3325-0597
Alma L BurlingameDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-8403-7307
Linda Van AelstDivision of Neuroscience, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID 0000-0002-0870-012X
Matthew N RasbandDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA. rasband@bcm.edu.ORCID 0000-0001-8184-2477
Baylor College of Medicine · USCold Spring Harbor Laboratory · USUniversity of California, San Francisco · USWeizmann Institute of Science · ILKhalifa University of Science and Technology · AE

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
The Molecular Architecture of Axons in Health and DiseaseR35NS122073 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI MATTHEW N RASBAND · 2021 to 2026
$5.6M
Molecular and cellular mechanisms governing interneuron development and connectivityR01MH119819 · NIMH · COLD SPRING HARBOR LABORATORY · PI VAN AELST, LINDA · 2019 to 2023
$3.3M
Neurodevelopmental Disorder-Associated Rho Regulators in Neocortical DevelopmentR01NS116897 · NINDS · COLD SPRING HARBOR LABORATORY · PI VAN AELST, LINDA · 2020 to 2024
$2.9M
NCI NIH HHS P30 CA045508NIMH NIH HHS R01 MH119819NINDS NIH HHS R01 NS116897NINDS NIH HHS R35 NS122073
6 · The paper itself

Abstract

Axon initial segment (AIS) cell surface proteins mediate key biological processes in neurons including action potential initiation and axo-axonic synapse formation. However, few AIS cell surface proteins have been identified. Here, we use antibody-directed proximity biotinylation to define the cell surface proteins in close proximity to the AIS cell adhesion molecule Neurofascin. To determine the distributions of the identified proteins, we use CRISPR-mediated genome editing for insertion of epitope tags in the endogenous proteins. We identify Contactin-1 (Cntn1) as an AIS cell surface protein. Cntn1 is enriched at the AIS through interactions with Neurofascin and NrCAM. We further show that Cntn1 contributes to assembly of the AIS extracellular matrix, and regulates AIS axo-axonic innervation by inhibitory basket cells in the cerebellum and inhibitory chandelier cells in the cortex.

Indexed as

Axon Initial SegmentBiological PhenomenaAntibodiesAxonsBiotinylationContactin 1Membrane ProteinsSynapsesAntibodiesContactin 1Membrane Proteins

Identifiers

PMID37884508
PMCPMC10603070
OpenAlexW4387966011

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.