Evidence map›Paper›PMID 37883896›Full record

ArticleEuropean journal of medicinal chemistry2023

Covalent and noncovalent strategies for targeting Lys102 in HIV-1 reverse transcriptase.

Giavana R Prucha, Sean Henry, Klarissa Hollander, Zachary J Carter, Krasimir A Spasov, William L Jorgensen, Karen S Anderson

Abstract read
In one paragraph

Article in European journal of medicinal chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Giavana R PruchaDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT, 06520-8066, USA.
Sean HenryDepartment of Chemistry, Yale University, New Haven, CT, 06520-8107, USA.
Klarissa HollanderDepartment of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT, 06520-8066, USA.
Zachary J CarterDepartment of Chemistry, Yale University, New Haven, CT, 06520-8107, USA.
Krasimir A SpasovDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT, 06520-8066, USA.
William L JorgensenDepartment of Chemistry, Yale University, New Haven, CT, 06520-8107, USA. Electronic address: william.jorgensen@yale.edu.
Karen S AndersonDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT, 06520-8066, USA; Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT, 06520-8066, USA. Electronic address: karen.anderson@yale.edu.

Funding

MECHANISM AND INHIBITION OF HIV REVERSE TRANSCRIPTASER01GM049551 · NIGMS · YALE UNIVERSITY · PI ANDERSON, KAREN S. · 1993 to 2019
$9.0M
POTENTIAL FUNCTIONS FOR WATER PROTEIN INTERACTIONSR01GM032136 · NIGMS · YALE UNIVERSITY · PI JORGENSEN, WILLIAM L. · 1985 to 2023
$8.2M
COMPUTER-AIDED DESIGN OF ANTIHIV DRUGSR01AI044616 · NIAID · YALE UNIVERSITY · PI JORGENSEN, WILLIAM L. · 1999 to 2022
$7.7M
Mechanism and Inhibition of HIV Reverse TranscriptaseR01AI155072 · NIAID · YALE UNIVERSITY · PI ANDERSON, KAREN S. · 2020 to 2023
$3.0M
NIAID NIH HHS R01 AI044616NIAID NIH HHS R01 AI155072NIGMS NIH HHS R01 GM032136NIGMS NIH HHS R01 GM049551
6 · The paper itself

Abstract

Reverse transcriptase (RT) is one of three key proteins responsible for the replication cycle of HIV-1 in the host. Several classes of inhibitors have been developed to target the enzyme, with non-nucleoside reverse transcriptase inhibitors forming first-line treatment. Previously, covalent RT inhibitors have been identified and found to bind irreversibly to commonly mutated residues such as Y181C. In this work we aim to circumvent the issue of NNRTI resistance through targeting K102, which has not yet been identified to confer drug resistance. As reported here, 34 compounds were synthesized and characterized biochemically and structurally with wild-type (WT) HIV-1 RT. Two of these inhibitors demonstrate covalent inhibition as evidenced by protein crystallography, enzyme kinetics, mass spectrometry, and antiviral potency in HIV-1 infected human T-cell assays.

Indexed as

Anti-HIV AgentsHIV Reverse TranscriptaseHumansReverse Transcriptase InhibitorsAnti-HIV AgentsHIV Reverse Transcriptasereverse transcriptase, Human immunodeficiency virus 1Reverse Transcriptase InhibitorsCovalent non-nucleoside reverse transcriptase inhibitorsDrug designReverse transcriptase inhibitors

Identifiers

PMID37883896
PMCPMC10872499

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.