Evidence map›Paper›PMID 37883423›Full record

ArticlePloS one2023

Transcriptomic data exploring the effect of agave fructans on the induction of the defense system in avocado fruit.

Esther Angélica Cuéllar-Torres, Selene Aguilera-Aguirre, Ulises Miguel López-García, Miguel Ángel Hernández-Oñate, Efigenia Montalvo-González, Rosa Isela Ortiz-Basurto, Julio Vega-Arreguín, Alejandra Chacón-López

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Esther Angélica Cuéllar-TorresInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Selene Aguilera-AguirreInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Ulises Miguel López-GarcíaInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Miguel Ángel Hernández-OñateCoordinación de Tecnología de Alimentos de Origen Vegetal, Centro de Investigación en Alimentación y Desarrollo A.C., Hermosillo, Sonora, México.
Efigenia Montalvo-GonzálezInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Rosa Isela Ortiz-BasurtoInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Julio Vega-ArreguínLaboratorio de Ciencias Agrogenómicas and Laboratorio Nacional PlanTECC, Escuela Nacional de Estudios Superiores, Universidad Nacional Autónoma de México, León, Guanajuato, México.ORCID 0000-0002-4509-4122
Alejandra Chacón-LópezInstituto Tecnológico de Tepic, Tecnológico Nacional de México, Tepic, Nayarit, México.
Tecnológico Nacional de México · MXCentro de Investigación en Alimentación y Desarrollo · MXUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effect of 20% high degree polymerized agave fructans (HDPAF) on the induction of the defense system in avocado fruits was investigated by transcriptomic analysis at 1, 24 and 72 h after treatment, and the effect of HDPAF on respiration rate and ethylene production was also analyzed. Transcriptomic profiling revealed 5425 differentially expressed genes (DEGs), 55 of which were involved in the pathways related to plant defense response to pathogens. Key genes were associated with phenylpropanoid biosynthesis, mitogen-activated protein signaling, plant hormone signaling, calcium ion signal decoding, and pathogenesis-related proteins. Dysregulated genes involved in ethylene biosynthesis were also identified, and the reduction in ethylene production by HDPAF was corroborated by gas chromatography, where three days of delayed peak production was observed compared to that in water-treated fruits. These results help to understand the mechanism of induction of the avocado defense system by applying HDPAF and support the application of HDPAF as an efficient postharvest treatment to extend the shelf life of the fruit.

Indexed as

AgavePerseaEthylenesFructansFruitGene Expression Regulation, PlantTranscriptomeethyleneEthylenesFructans

Identifiers

PMID37883423
PMCPMC10602311
OpenAlexW4387965747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.