Evidence map›Paper›PMID 37882631›Full record

ArticleNeuro-oncology2024

Proteometabolomics of initial and recurrent glioblastoma highlights an increased immune cell signature with altered lipid metabolism.

Miguel Cosenza-Contreras, Agnes Schäfer, Justin Sing, Lena Cook, Maren N Stillger, Chia-Yi Chen, Jose Villacorta Hidalgo, Niko Pinter, Larissa Meyer, Tilman Werner and 22 more

Open access · greenAbstract read
In one paragraph

Article in Neuro-oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 11 institutions in 6 countries.

Miguel Cosenza-ContrerasInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.ORCID 0000-0002-9727-3229
Agnes SchäferDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Justin SingDepartment of Molecular Genetics, University of Toronto, Toronto, ON, Canada.ORCID 0000-0003-0386-0092
Lena CookDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Maren N StillgerInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Chia-Yi ChenInstitute of Molecular Medicine and Cell Research, University of Freiburg, Freiburg, Germany.
Jose Villacorta HidalgoInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Niko PinterInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Larissa MeyerInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Tilman WernerInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Darleen BugDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Zeno HaberlDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Oliver KübeckDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Kai ZhaoDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Susanne SteiDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Anca Violeta GafencuInstitute of Cellular Biology and Pathology " Nicolae Simionescu," Bucharest, Romania.
Radu IonitaInstitute of Cellular Biology and Pathology " Nicolae Simionescu," Bucharest, Romania.
Felix M BreharDepartment of Neurosurgery, Carol Davila University of Medicine and Pharmacy, Bucharest, Romania.
Jaime Ferrer-LozanoDepartment of Pathology Hospital Universitari i Politècnic La Fe, València, Spain.
Gloria RibasBiomedical Imaging Research Group (GIBI230) Instituto de Investigación Sanitaria La Fe, Valencia, Spain.
Leo Cerdá-AlberichBiomedical Imaging Research Group (GIBI230) Instituto de Investigación Sanitaria La Fe, Valencia, Spain.
Luis Martí-BonmatíDepartment of Pathology Hospital Universitari i Politècnic La Fe, València, Spain.
Christopher NimskyDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Alexis Van StraatenDepartment of medical informatics and evaluation of practices, Assistance Publique-Hôpitaux de Paris Centre, Paris University & European Hospital Georges Pompidou, Paris, France.
Martin L BiniossekInstitute of Molecular Medicine and Cell Research, University of Freiburg, Freiburg, Germany.
Melanie FöllInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.
Nina Cabezas-WallscheidMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Jörg BüscherMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Hannes RöstDepartment of Molecular Genetics, University of Toronto, Toronto, ON, Canada.
Armelle ArnouxClinical Epidemiology INSERM & Clinical Research Unit, Assistance Publique-Hôpitaux de Paris Centre, Paris University & European Hospital Georges Pompidou, Paris, France.ORCID 0000-0003-3427-7086
Jörg W BartschDepartment of Neurosurgery, Philipps University Marburg, Marburg, Germany.
Oliver SchillingInstitute of Surgical Pathology, Faculty of Medicine, University Medical Center Freiburg, Freiburg, Germany.ORCID 0000-0001-7678-7653
Philipps University of Marburg · DEUniversity of Freiburg · DEUniversity Medical Center Freiburg · DEHospital Universitari i Politècnic La Fe · ESInstituto de Investigación Sanitaria La Fe · ESMax Planck Institute of Immunobiology and Epigenetics · DEUniversity of Toronto · CAAssistance Publique – Hôpitaux de Paris · FRBoston University · USCarol Davila University of Medicine and Pharmacy · ROInserm · FR

Funding

BMBF KMUi program 13GW0603ECollaborative Research Centre 992 Medical Epigenetics SFB 992/1 2012Deutsche Forschungsgemeinschaft 446058856Deutsche Forschungsgemeinschaft BA1606/3-1ERA PerMed program 01KU1916ERA PerMed program PerProGlio 01KU1916BERA TransCan program 01KT2201German Consortium for Translational Cancer ResearchGerman Federal Ministry of Education and Research BMBF 031 A538AinvestBW program BW1_1198/03Medical-Scientist-Programme, Faculty of Medicine, University of FreiburgUniversity Medical Center Giessen and Marburgvon Behring-Röntgen Foundation 70_00034
6 · The paper itself

Abstract

backgroundThere is an urgent need to better understand the mechanisms associated with the development, progression, and onset of recurrence after initial surgery in glioblastoma (GBM). The use of integrative phenotype-focused -omics technologies such as proteomics and lipidomics provides an unbiased approach to explore the molecular evolution of the tumor and its associated environment.

methodsWe assembled a cohort of patient-matched initial (iGBM) and recurrent (rGBM) specimens of resected GBM. Proteome and metabolome composition were determined by mass spectrometry-based techniques. We performed neutrophil-GBM cell coculture experiments to evaluate the behavior of rGBM-enriched proteins in the tumor microenvironment. ELISA-based quantitation of candidate proteins was performed to test the association of their plasma concentrations in iGBM with the onset of recurrence.

resultsProteomic profiles reflect increased immune cell infiltration and extracellular matrix reorganization in rGBM. ASAH1, SYMN, and GPNMB were highly enriched proteins in rGBM. Lipidomics indicates the downregulation of ceramides in rGBM. Cell analyses suggest a role for ASAH1 in neutrophils and its localization in extracellular traps. Plasma concentrations of ASAH1 and SYNM show an association with time to recurrence.

conclusionsWe describe the potential importance of ASAH1 in tumor progression and development of rGBM via metabolic rearrangement and showcase the feedback from the tumor microenvironment to plasma proteome profiles. We report the potential of ASAH1 and SYNM as plasma markers of rGBM progression. The published datasets can be considered as a resource for further functional and biomarker studies involving additional -omics technologies.

Indexed as

Brain NeoplasmsGlioblastomaCeramidesHumansLipid MetabolismMembrane GlycoproteinsProteomeProteomicsTumor MicroenvironmentCeramidesGPNMB protein, humanMembrane GlycoproteinsProteomeacid ceramidaseglioblastomalipidomicsproteomicstumor microenvironment

Identifiers

PMID37882631
PMCPMC10912002
OpenAlexW4387946694

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.