Evidence map›Paper›PMID 37882521›Full record

ArticleJournal of virology2023

PGAM5 degrades PDCoV N protein and activates type I interferon to antagonize viral replication.

Xinyu Yang, Ning Kong, Wenzhen Qin, Xueying Zhai, Yiyi Song, Wu Tong, Liwei Li, Changlong Liu, Hao Zheng, Hai Yu and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Xinyu Yang *Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Ning Kong *Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Wenzhen Qin *Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Xueying ZhaiShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Yiyi SongShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Wu TongShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Liwei LiShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Changlong LiuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Hao ZhengShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Hai YuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.
Wen ZhangSchool of Medicine, Jiangsu University , Zhenjiang, China.ORCID 0000-0002-9352-6153
Guangzhi TongShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.ORCID 0000-0001-7048-0837
Tongling ShanShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences , Shanghai, China.ORCID 0000-0002-5329-6349
Shanghai Veterinary Research Institute · CNJiangsu University · CN

Funding

MOA | CAFS | Central Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery Sciences (Central Public-interest Scientific Institution Basal Research Fund, CAFS) no.Y2022QC28MOST | National Key Research and Development Program of China (NKPs) no.2021YFD1801102MOST | National Natural Science Foundation of China (NSFC) no.32272999 and 32102665
6 · The paper itself

Abstract

importanceAs a member of the δ-coronavirus family, porcine deltacoronavirus (PDCoV) is a vital reason for diarrhea in piglets, which can contribute to high morbidity and mortality rates. Initially identified in Hong Kong in 2012, the virus has rapidly spread worldwide. During PDCoV infection, the virus employs evasion mechanisms to evade host surveillance, while the host mounts corresponding responses to impede viral replication. Our research has revealed that PDCoV infection down-regulates the expression of PGAM5 to promote virus replication. In contrast, PGAM5 degrades PDCoV N through autophagy by interacting with the cargo receptor P62 and the E3 ubiquitination ligase STUB1. Additionally, PGAM5 interacts with MyD88 and TRAF3 to activate the IFN signal pathway, resulting in the inhibition of viral replication.

Indexed as

Coronavirus InfectionsCoronavirus Nucleocapsid ProteinsDeltacoronavirusInterferon Type IMitochondrial ProteinsPhosphoprotein PhosphatasesProteolysisSwineSwine DiseasesVirus ReplicationAnimalsDown-RegulationImmune EvasionRNA-Binding ProteinsSignal TransductionUbiquitin-Protein LigasesCoronavirus Nucleocapsid ProteinsInterferon Type IMitochondrial ProteinsPhosphoprotein PhosphatasesRNA-Binding ProteinsUbiquitin-Protein LigasesautophagyN proteinPDCoVPGAM5type I interferon

Identifiers

PMID37882521
PMCPMC10688367
OpenAlexW4387948838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.