Evidence map›Paper›PMID 37881491›Full record

ArticleFrontiers in oncology2023

TP53-PTEN-NF1 depletion in human brain organoids produces a glioma phenotype

Sanjay K Singh, Yan Wang, Ahmed Habib, Mamindla Priyadarshini, Chowdari V Kodavali, Apeng Chen, Wencai Ma, Jing Wang, N U Farrukh Hameed, Baoli Hu and 6 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Review
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  4. Review
  5. Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Sanjay K SinghDepartment of Neurosurgery, MD Anderson Cancer Center, Houston, TX, United States.
Yan WangDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Ahmed HabibDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Mamindla PriyadarshiniDepartment of Radiology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Chowdari V KodavaliDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Apeng ChenDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Wencai MaDepartment of Radiology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Jing WangDepartment of Bioinformatics, MD Anderson Cancer Center, Houston, TX, United States.
N U Farrukh HameedDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Baoli HuDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Gregory N FullerDepartment of Pathology, MD Anderson Cancer Center, Houston, TX, United States.
Scott M KulichDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Nduka AmankulorDepartment of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia, PA, United States.
Rivka R ColenDepartment of Pathology, MD Anderson Cancer Center, Houston, TX, United States.
Lincoln A EdwardsDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Pascal O ZinnDepartment of Neurosurgery, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
University of Pittsburgh Medical Center · USThe University of Texas MD Anderson Cancer Center · USHospital of the University of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma (GBM) is fatal and the study of therapeutic resistance, disease progression, and drug discovery in GBM or glioma stem cells is often hindered by limited resources. This limitation slows down progress in both drug discovery and patient survival. Here we present a genetically engineered human cerebral organoid model with a cancer-like phenotype that could provide a basis for GBM-like models. Specifically, we engineered a doxycycline-inducible vector encoding shRNAs enabling depletion of the TP53, PTEN, and NF1 tumor suppressors in human cerebral organoids. Designated as inducible short hairpin-TP53-PTEN-NF1 (ish-TPN), doxycycline treatment resulted in human cancer-like cerebral organoids that effaced the entire organoid cytoarchitecture, while uninduced ish-TPN cerebral organoids recapitulated the normal cytoarchitecture of the brain. Transcriptomic analysis revealed a proneural GBM subtype. This proof-of-concept study offers a valuable resource for directly investigating the emergence and progression of gliomas within the context of specific genetic alterations in normal cerebral organoids.

Indexed as

and NF1 tumor suppressorsglioblastomanestinorganoidproneural GBM subtypePTENTP53

Identifiers

PMID37881491
PMCPMC10597663
OpenAlexW4387499168

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.