Evidence map›Paper›PMID 37881369›Full record

ArticleFrontiers in cellular and infection microbiology2023

Response mechanisms to acid stress promote LF82 replication in macrophages.

Ting Yao, Yu Huang, Zimeng Huai, Xingmei Liu, Xiaowen Liu, Yutao Liu, Hao Sun, Yu Pang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Deciphering the Implications ofPathogens (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ting YaoTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Yu HuangTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Zimeng HuaiTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Xingmei LiuTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Xiaowen LiuAcademy of Psychology and Behavior, Faculty of Psychology, Tianjin Normal University, Tianjin, China.
Yutao LiuTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Hao SunTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Yu PangTEDA Institute of Biological Sciences and Biotechnology, Nankai University, Tianjin, China.
Nankai University · CNTianjin Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Adherent-invasive Methods: We compared the transcriptomics of LF82 at pH=7.5 and pH=5.8 by RNA-sequencing, and qRT-PCR verified differentially expressed genes (DEGs). The deletion mutants of DEGs in the treatment group (pH=5.8) compared to the control group (pH=7.5) were constructed by λ recombinant. The replication differences between the mutants and WT infected Raw 264.7 at 24 h.p.i were analyzed by combining LB solid plate count and confocal observation. NH Results: In this study, we found that infection with LF82 results in acidification of macrophages. Subsequent experiments demonstrated that an intracellular acidic environment is necessary for LF82 replication. Transcriptome and phenotypic analysis showed that high expression of acid shock genes and acid fitness genes promotes LF82 replication in macrophages. Further, we found that the replication of LF82 in macrophages was increased under nitrate treatment, and nitrogen metabolism genes of LF82 were upregulated in acid treatment. The replication in macrophages of Conclusion: In this study, we simulated the acidic environment in macrophages, combined with transcriptome technology, and explained from the genetic level that LF82 promotes replication by activating its acid shock and fitness system, enhancing nitrate utilization, and inhibiting flagellar function.

Indexed as

Crohn DiseaseEscherichia coli InfectionsBacterial AdhesionEscherichia coliHumansIntestinal MucosaMacrophagesNitratesNitratesacid fitnessacid shockadherent-invasive E. coli (AIEC)flagellarmacrophagesnitrate utilization

Identifiers

PMID37881369
PMCPMC10595154
OpenAlexW4387514209

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.