Evidence map›Paper›PMID 37880563›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2023

An elevated OmpA expression during the production of a recombinant protein in Escherichia coli.

Frans Kurnia, Gestria Novirani, Fatiha Khairunnisa, Vincencius F Meidianto, Wangsa T Ismaya, Raymond R Tjandrawinata

Abstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Frans KurniaDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia.
Gestria NoviraniDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia.
Fatiha KhairunnisaDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia.ORCID http://orcid.org/0000-0002-3545-5545
Vincencius F MeidiantoDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia.
Wangsa T IsmayaDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia.ORCID http://orcid.org/0000-0001-5467-5343
Raymond R TjandrawinataDexa Laboratories of Biomolecular Sciences, PT Dexa Medica, Industri Selatan V Blok PP-7, Jababeka 2 Industrial Estate, Cikarang, 17550, Indonesia. raymond@dexa-medica.com.ORCID http://orcid.org/0000-0003-0461-9874

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli cells rapidly respond to changes in the environment. Such response must be anticipated upon development of fermentation strategy for commercial purposes. The response may signal changes in cell physiology, which is critical for the cell growth and the level of the target protein production. One of the responses is the elevated expression of membrane proteins to tightly control the trafficking of molecules into and out from the cells. Normally, the expression level of the membrane protein is basal as the fermentation is carried out in physiological conditions. Here, we reported an elevated expression of the outer membrane protein A (OmpA) during a series of fermentation conduct, starting from the shake flask, 1-L to finally 10-L fermentor. The incidence led to a lower expression of the target protein and thereby resulting in lower process efficiency. OmpA expression was concomitant to the bacterial growth and already observed in the early exponential phase. Despite the drawback, this phenomenon actually inspires the observation of OmpA expression as one of the indicators for the E. coli cells response to the fermentation conditions. This auxiliary check would prevent the higher OmpA expression that led to the low expression of the target protein.

Indexed as

Escherichia coliEscherichia coli ProteinsBacterial Outer Membrane ProteinsRecombinant ProteinsBacterial Outer Membrane ProteinsEscherichia coli ProteinsOMPA outer membrane proteinsRecombinant ProteinsEscherichia coliFermentationOmpARecombinant protein expressionUpscaling

Identifiers

PMID37880563
PMCPMC10689305

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.