Evidence map›Paper›PMID 37880333›Full record

ArticleScientific reports2023

Augmentation strategies for an imbalanced learning problem on a novel COVID-19 severity dataset.

Daniel Schaudt, Reinhold von Schwerin, Alexander Hafner, Pascal Riedel, Manfred Reichert, Marianne von Schwerin, Meinrad Beer, Christopher Kloth

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daniel SchaudtDepartment of Computer Science, Ulm University of Applied Science, Albert-Einstein-Allee 55, 89081, Ulm, Baden-Wurttemberg, Germany. daniel.schaudt@thu.de.
Reinhold von SchwerinDepartment of Computer Science, Ulm University of Applied Science, Albert-Einstein-Allee 55, 89081, Ulm, Baden-Wurttemberg, Germany.
Alexander HafnerDepartment of Computer Science, Ulm University of Applied Science, Albert-Einstein-Allee 55, 89081, Ulm, Baden-Wurttemberg, Germany.
Pascal RiedelDepartment of Computer Science, Ulm University of Applied Science, Albert-Einstein-Allee 55, 89081, Ulm, Baden-Wurttemberg, Germany.
Manfred ReichertInstitute of Databases and Information Systems, Ulm University, James-Franck-Ring, 89081, Ulm, Baden-Wurttemberg, Germany.
Marianne von SchwerinDepartment of Computer Science, Ulm University of Applied Science, Albert-Einstein-Allee 55, 89081, Ulm, Baden-Wurttemberg, Germany.
Meinrad BeerDepartment of Radiology, University Hospital of Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Baden-Wurttemberg, Germany.
Christopher KlothDepartment of Radiology, University Hospital of Ulm, Albert-Einstein-Allee 23, 89081, Ulm, Baden-Wurttemberg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since the beginning of the COVID-19 pandemic, many different machine learning models have been developed to detect and verify COVID-19 pneumonia based on chest X-ray images. Although promising, binary models have only limited implications for medical treatment, whereas the prediction of disease severity suggests more suitable and specific treatment options. In this study, we publish severity scores for the 2358 COVID-19 positive images in the COVIDx8B dataset, creating one of the largest collections of publicly available COVID-19 severity data. Furthermore, we train and evaluate deep learning models on the newly created dataset to provide a first benchmark for the severity classification task. One of the main challenges of this dataset is the skewed class distribution, resulting in undesirable model performance for the most severe cases. We therefore propose and examine different augmentation strategies, specifically targeting majority and minority classes. Our augmentation strategies show significant improvements in precision and recall values for the rare and most severe cases. While the models might not yet fulfill medical requirements, they serve as an appropriate starting point for further research with the proposed dataset to optimize clinical resource allocation and treatment.

Indexed as

COVID-19PandemicsBenchmarkingHumansMachine LearningMental Recall

Identifiers

PMID37880333
PMCPMC10600145

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.