Evidence map›Paper›PMID 37878693›Full record

ArticleScience advances2023

Nimbolide targets RNF114 to induce the trapping of PARP1 and synthetic lethality in

Peng Li, Yuanli Zhen, Chiho Kim, Zhengshuai Liu, Jianwei Hao, Heping Deng, Hejun Deng, Min Zhou, Xu-Dong Wang, Tian Qin and 1 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 49 citations in OpenAlex.

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  15. ADPr gets a ubiquitin upgrade.Nature chemical biology · 2025
    Article
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  20. TRIM28 drives immune evasion via PARP1 SUMOylation and NADJournal for immunotherapy of cancer · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Peng LiDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0002-7751-1146
Yuanli ZhenDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Chiho KimDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0001-6846-5515
Zhengshuai LiuDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0009-0003-2544-947X
Jianwei HaoDepartment of Molecular Pharmacology and Therapeutics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY 10032, USA.
Heping DengDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Hejun DengDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Min ZhouDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Xu-Dong WangDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0002-8265-1485
Tian QinDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0001-7225-3224
Yonghao YuDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0001-8414-4666
The University of Texas Southwestern Medical Center · USColumbia University · US

Funding

Posttranslational Regulation of Cell Growth and Stress ResponsesR35GM134883 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI YU, YONGHAO · 2020 to 2024
$2.7M
Development of Sulfur-Based Reactions with Translational ApplicationsR01GM141088 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Tian Qin · 2021 to 2026
$2.1M
A Chemical Footprinting Approach towards Poly-ADP-Ribosylation-regulated Biomolecular CondensationR01NS122533 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI Yonghao Yu · 2022 to 2026
$2.0M
Site-Specific Antibody for Protein Poly-ADP-RibosylationR21CA261018 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI YU, YONGHAO · 2021 to 2021
$421k
NCI NIH HHS R21 CA261018NIGMS NIH HHS R01 GM141088NIGMS NIH HHS R35 GM134883NINDS NIH HHS R01 NS122533
6 · The paper itself

Abstract

Recent studies have pointed to PARP1 trapping as a key determinant of the anticancer effects of PARP1 inhibitors (PARPi). We identified RNF114, as a PARylation-dependent, E3 ubiquitin ligase involved in DNA damage response. Upon sensing genotoxicity, RNF114 was recruited, in a PAR-dependent manner, to DNA lesions, where it targeted PARP1 for degradation. The blockade of this pathway interfered with the removal of PARP1 from DNA lesions, leading to profound PARP1 trapping. We showed that a natural product, nimbolide, inhibited the E3 ligase activity of RNF114 and thus caused PARP1 trapping. However, unlike conventional PARPi, nimbolide treatment induced the trapping of both PARP1 and PARylation-dependent DNA repair factors. Nimbolide showed synthetic lethality with

Indexed as

NeoplasmsSynthetic Lethal MutationsDNAHumansLimoninsPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsDNALimoninsnimbolidePARP1 protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase Inhibitors

Identifiers

PMID37878693
PMCPMC10599614
OpenAlexW4387948573

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.