Evidence map›Paper›PMID 37877738›Full record

ArticleAnalytical chemistry2023

Top-Down Proteoform Analysis by 2D MS with Quadrupolar Detection.

Marek Polák, Michael Palasser, Alan Kádek, Daniel Kavan, Christopher A Wootton, Marc-André Delsuc, Kathrin Breuker, Petr Novák, Maria A van Agthoven

Open access · hybridAbstract read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Absorption Mode Broadband 2D MS for Proteomics and Metabolomics.Journal of the American Society for Mass Spectrometry · 2026
    Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Marek PolákInstitute of Microbiology of the Czech Academy of Sciences, Prague 14220, Czech Republic.
Michael PalasserCenter for Chemistry and Biomedicine, University of Innsbruck, Innrain 80/82, 6020 Innsbruck, Austria.
Alan KádekInstitute of Microbiology of the Czech Academy of Sciences, Prague 14220, Czech Republic.
Daniel KavanInstitute of Microbiology of the Czech Academy of Sciences, Prague 14220, Czech Republic.
Christopher A WoottonBruker Daltonics GmbH & Co KG, Fahrenheitstraße 4, 28359 Bremen, Germany.
Marc-André DelsucInstitut de Génétique et de Biologie Moléculaire et Cellulaire, INSERM, U596, CNRS, UMR7104, Université de Strasbourg, 1 rue Laurent Fries, 67404 Illkirch-Graffenstaden, France.ORCID 0000-0002-1400-5326
Kathrin BreukerCenter for Chemistry and Biomedicine, University of Innsbruck, Innrain 80/82, 6020 Innsbruck, Austria.ORCID 0000-0002-4978-0883
Petr NovákInstitute of Microbiology of the Czech Academy of Sciences, Prague 14220, Czech Republic.ORCID 0000-0001-8688-529X
Maria A van AgthovenInstitute of Microbiology of the Czech Academy of Sciences, Prague 14220, Czech Republic.ORCID 0000-0003-2438-3934
Czech Academy of Sciences · CZUniversität Innsbruck · ATCentre National de la Recherche Scientifique · FRFahrenheit (Germany) · DE

Funding

Austrian Science Fund FWF M 2757
6 · The paper itself

Abstract

Two-dimensional mass spectrometry (2D MS) is a multiplexed tandem mass spectrometry method that does not rely on ion isolation to correlate the precursor and fragment ions. On a Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS), 2D MS instead uses the modulation of precursor ion radii inside the ICR cell before fragmentation and yields 2D mass spectra that show the fragmentation patterns of all the analytes. In this study, we perform 2D MS for the first time with quadrupolar detection in a dynamically harmonized ICR cell. We discuss the advantages of quadrupolar detection in 2D MS and how we adapted existing data processing techniques for accurate frequency-to-mass conversion. We apply 2D MS with quadrupolar detection to the top-down analysis of covalently labeled ubiquitin with ECD fragmentation, and we develop a workflow for label-free relative quantification of biomolecule isoforms in 2D MS.

Indexed as

ProteomicsTandem Mass SpectrometryCyclotronsFourier AnalysisUbiquitinUbiquitin

Identifiers

PMID37877738
PMCPMC10633810
OpenAlexW4387930745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.