Evidence map›Paper›PMID 37877156›Full record

ArticleJournal of experimental zoology. Part B, Molecular and developmental evolution2024

Suppressors of cGAS-STING are downregulated during fin-limb regeneration and aging in aquatic vertebrates.

Sabateeshan Mathavarajah, Andrew W Thompson, Matthew R Stoyek, T Alexander Quinn, Stéphane Roy, Ingo Braasch, Graham Dellaire

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental zoology. Part B, Molecular and developmental evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Sabateeshan MathavarajahDepartment of Pathology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.
Andrew W ThompsonDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan, USA.ORCID http://orcid.org/0000-0002-1198-6130
Matthew R StoyekDepartment of Physiology and Biophysics, Dalhousie University, Halifax, Nova Scotia, Canada.
T Alexander QuinnDepartment of Physiology and Biophysics, Dalhousie University, Halifax, Nova Scotia, Canada.
Stéphane RoyDepartment of Stomatology, Faculty of Dentistry, Université de Montréal, Montréal, Quebec, Canada.
Ingo BraaschDepartment of Integrative Biology, Michigan State University, East Lansing, Michigan, USA.ORCID http://orcid.org/0000-0003-4766-611X
Graham DellaireDepartment of Pathology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada.ORCID http://orcid.org/0000-0002-3466-6316
Dalhousie University · CAMichigan State University · USUniversité de Montréal · CAWestern Michigan University · US

Funding

Resources for Teleost Gene Duplicates and Human DiseaseR01OD011116 · OD · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN H. · 2012 to 2020
$5.4M
Aquatic Models of Human Disease 2020, 10th annual meetingR13OD030023 · OD · BOSTON CHILDREN'S HOSPITAL · PI BRAASCH, INGO, HARRIS, MATTHEW P · 2020 to 2020
$20k
NIH HHS R01 OD011116
6 · The paper itself

Abstract

During the early stages of limb and fin regeneration in aquatic vertebrates (i.e., fishes and amphibians), blastema undergo transcriptional rewiring of innate immune signaling pathways to promote immune cell recruitment. In mammals, a fundamental component of innate immune signaling is the cytosolic DNA sensing pathway, cGAS-STING. However, to what extent the cGAS-STING pathway influences regeneration in aquatic anamniotes is unknown. In jawed vertebrates, negative regulation of cGAS-STING activity is accomplished by suppressors of cytosolic DNA such as Trex1, Pml, and PML-like exon 9 (Plex9) exonucleases. Here, we examine the expression of these suppressors of cGAS-STING, as well as inflammatory genes and cGAS activity during caudal fin and limb regeneration using the spotted gar (Lepisosteus oculatus) and axolotl (Ambystoma mexicanum) model species, and during age-related senescence in zebrafish (Danio rerio). In the regenerative blastema of wounded gar and axolotl, we observe increased inflammatory gene expression, including interferon genes and interleukins 6 and 8. We also observed a decrease in axolotl Trex1 and gar pml expression during the early phases of wound healing which correlates with a dramatic increase in cGAS activity. In contrast, the plex9.1 gene does not change in expression during wound healing in gar. However, we observed decreased expression of plex9.1 in the senescing cardiac tissue of aged zebrafish, where 2'3'-cGAMP levels are elevated. Finally, we demonstrate a similar pattern of Trex1, pml, and plex9.1 gene regulation across species in response to exogenous 2'3'-cGAMP. Thus, during the early stages of limb-fin regeneration, Pml, Trex1, and Plex9.1 exonucleases are downregulated, presumably to allow an evolutionarily ancient cGAS-STING activity to promote inflammation and the recruitment of immune cells.

Indexed as

AgingDown-RegulationRegenerationAmbystoma mexicanumAnimal FinsAnimalsExodeoxyribonucleasesExtremitiesFishesMembrane ProteinsPhosphoproteinsZebrafishExodeoxyribonucleasesMembrane ProteinsPhosphoproteinsthree prime repair exonuclease 1cGAS‐STINGfin regenerationlimb regenerationPlex9.1PMLTREX1

Identifiers

PMID37877156
PMCPMC11043210
OpenAlexW4387930871

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.