Evidence map›Paper›PMID 37874731›Full record

ArticleIEEE transactions on bio-medical engineering2024

Reliable Prostate Cancer Risk Mapping From MRI Using Targeted and Systematic Core Needle Biopsy Histopathology.

Tal Zeevi, Michael S Leapman, Preston C Sprenkle, Rajesh Venkataraman, Lawrence H Staib, John A Onofrey

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Article in IEEE transactions on bio-medical engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Tal Zeevi
Michael S Leapman
Preston C Sprenkle
Rajesh Venkataraman
Lawrence H Staib
John A Onofrey

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Image Analysis Tools for mpMRI Prostate Cancer Diagnosis Using PI-RADSR42CA224888 · NCI · EIGEN HEALTH SERVICES LLC · PI ONOFREY, JOHN AARON · 2020 to 2021
$1.5M
NCATS NIH HHS UL1 TR001863NCI NIH HHS R42 CA224888
6 · The paper itself

Abstract

objectiveTo compute a dense prostate cancer risk map for the individual patient post-biopsy from magnetic resonance imaging (MRI) and to provide a more reliable evaluation of its fitness in prostate regions that were not identified as suspicious for cancer by a human-reader in pre- and intra-biopsy imaging analysis.

methodsLow-level pre-biopsy MRI biomarkers from targeted and non-targeted biopsy locations were extracted and statistically tested for representativeness against biomarkers from non-biopsied prostate regions. A probabilistic machine learning classifier was optimized to map biomarkers to their core-level pathology, followed by extrapolation of pathology scores to non-biopsied prostate regions. Goodness-of-fit was assessed at targeted and non-targeted biopsy locations for the post-biopsy individual patient.

resultsOur experiments showed high predictability of imaging biomarkers in differentiating histopathology scores in thousands of non-targeted core-biopsy locations (ROC-AUCs: 0.85-0.88), but also high variability between patients (Median ROC-AUC [IQR]: 0.81-0.89 [0.29-0.40]).

conclusionThe sparseness of prostate biopsy data makes the validation of a whole gland risk mapping a non-trivial task. Previous studies i) focused on targeted-biopsy locations although biopsy-specimens drawn from systematically scattered locations across the prostate constitute a more representative sample to non-biopsied regions, and ii) estimated prediction-power across predicted instances (e.g., biopsy specimens) with no patient distinction, which may lead to unreliable estimation of model fitness to the individual patient due to variation between patients in instance count, imaging characteristics, and pathologies. SIGNIFICANCE: This study proposes a personalized whole-gland prostate cancer risk mapping post-biopsy to allow clinicians to better stage and personalize focal therapy treatment plans.

Indexed as

Prostatic NeoplasmsBiomarkersBiopsy, Large-Core NeedleHumansImage-Guided BiopsyMagnetic Resonance ImagingMaleBiomarkers

Identifiers

PMID37874731
PMCPMC10901528

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.