Evidence map›Paper›PMID 37873851›Full record

ArticleInternational journal of neonatal screening2023

Multivariate Independent Component Analysis Identifies Patients in Newborn Screening Equally to Adjusted Reference Ranges.

Štěpán Kouřil, Julie de Sousa, Kamila Fačevicová, Alžběta Gardlo, Christoph Muehlmann, Klaus Nordhausen, David Friedecký, Tomáš Adam

Abstract read
In one paragraph

Article in International journal of neonatal screening, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Štěpán KouřilDepartment of Clinical Biochemistry, University Hospital Olomouc, 779 00 Olomouc, Czech Republic.
Julie de SousaLaboratory of Metabolomics, Institute of Molecular and Translational Medicine, Palacký University Olomouc, 779 00 Olomouc, Czech Republic.
Kamila FačevicováDepartment of Mathematical Analysis and Applications of Mathematics, Faculty of Science, Palacký University Olomouc, 779 00 Olomouc, Czech Republic.
Alžběta GardloDepartment of Clinical Biochemistry, University Hospital Olomouc, 779 00 Olomouc, Czech Republic.
Christoph MuehlmannInstitute of Statistics & Mathematical Methods in Economics, Vienna University of Technology, 1040 Vienna, Austria.
Klaus NordhausenDepartment of Mathematics and Statistics, University of Jyväskylä, 40014 Jyväskylä, Finland.ORCID 0000-0002-3758-8501
David FriedeckýDepartment of Clinical Biochemistry, University Hospital Olomouc, 779 00 Olomouc, Czech Republic.ORCID 0000-0002-3448-9073
Tomáš AdamDepartment of Clinical Biochemistry, University Hospital Olomouc, 779 00 Olomouc, Czech Republic.

Funding

Austrian Science Fund FWF P 31881
6 · The paper itself

Abstract

Newborn screening (NBS) of inborn errors of metabolism (IEMs) is based on the reference ranges established on a healthy newborn population using quantile statistics of molar concentrations of biomarkers and their ratios. The aim of this paper is to investigate whether multivariate independent component analysis (ICA) is a useful tool for the analysis of NBS data, and also to address the structure of the calculated ICA scores. NBS data were obtained from a routine NBS program performed between 2013 and 2022. ICA was tested on 10,213/150 free-diseased controls and 77/20 patients (9/3 different IEMs) in the discovery/validation phases, respectively. The same model computed during the discovery phase was used in the validation phase to confirm its validity. The plots of ICA scores were constructed, and the results were evaluated based on 5sd levels. Patient samples from 7/3 different diseases were clearly identified as 5sd-outlying from control groups in both phases of the study. Two IEMs containing only one patient each were separated at the 3sd level in the discovery phase. Moreover, in one latent variable, the effect of neonatal birth weight was evident. The results strongly suggest that ICA, together with an interpretation derived from values of the "average member of the score structure", is generally applicable and has the potential to be included in the decision process in the NBS program.

Indexed as

compositional data analysisinborn errors of metabolismindependent component analysismass spectrometrymultivariate statistical analysisnewborn screening

Identifiers

PMID37873851
PMCPMC10594528

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.