Evidence map›Paper›PMID 37873165›Full record

ArticlebioRxiv : the preprint server for biology2024

Sliding windows analysis can undo the effects of preprocessing when applied to fMRI data.

Martin A Lindquist

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Martin A LindquistDepartment of Biostatistics, Johns Hopkins University, Baltimore, MD.ORCID 0000-0003-2289-0828

Funding

Individualized spatial topology in functional neuroimagingR01EB026549 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI Abhirup Datta, Martin Lindquist · 2018 to 2026
$4.5M
Personalized spatiotemporal hemodynamic response models for functional magnetic resonance imagingR01MH129397 · NIMH · JOHNS HOPKINS UNIVERSITY · PI Martin Lindquist, TOR D. WAGER · 2022 to 2026
$3.8M
NIBIB NIH HHS R01 EB026549NIMH NIH HHS R01 MH129397
6 · The paper itself

Abstract

Resting-state fMRI (rs-fMRI) data is used to study the intrinsic functional connectivity (FC) in the human brain. In the past decade, interest has focused on studying the temporal dynamics of FC on short timescales, ranging from seconds to minutes. These studies of time-varying FC (TVFC) have enabled the classification of whole-brain dynamic FC profiles into distinct "brain states", defined as recurring whole-brain connectivity profiles reliably observed across subjects and sessions. The analysis of rs-fMRI data is complicated by the fact that the measured BOLD signal consists of changes induced by neuronal activation, as well as non-neuronal nuisance fluctuations that should be removed prior to further analysis. Thus, the data undergoes significant preprocesing prior to analysis. In previous work [24], we illustrated the potential pitfalls involved with using modular preprocessing pipelines, showing how later preprocessing steps can

Indexed as

artifactsdynamic connectivitymotionpreprocessingresting-state fMRItime-varying connectivity

Identifiers

PMID37873165
PMCPMC10592634

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.