Evidence map›Paper›PMID 37872461›Full record

ArticleFood and environmental virology2023

Molecular Characterization of Gastroenteric Viruses in Wastewater from Cities in Uruguay.

Bortagaray Viviana, Salvo Matias, Mir Daiana, Colina Rodney, Victoria Matias

Abstract read
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In one paragraph

Article in Food and environmental virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Bortagaray VivianaLaboratory of Molecular Virology, Department of Biological Sciences, CENUR Litoral Norte, Sede Salto, Universidad de la República, Salto, Uruguay.
Salvo MatiasDepartment of Water, CENUR Litoral Norte, Sede Salto, Universidad de la República, Salto, Uruguay.
Mir DaianaGenomic and Bioinformatic Unit, Department of Biological Sciences, CENUR Litoral Norte, Sede Salto, Universidad de la República, Salto, Uruguay.
Colina RodneyLaboratory of Molecular Virology, Department of Biological Sciences, CENUR Litoral Norte, Sede Salto, Universidad de la República, Salto, Uruguay.
Victoria MatiasLaboratory of Molecular Virology, Department of Biological Sciences, CENUR Litoral Norte, Sede Salto, Universidad de la República, Salto, Uruguay. matvicmon@gmail.com.

Funding

National Agency of Research and Innovation (ANII) FCE_1_2017_1_136092
6 · The paper itself

Abstract

Group A Rotavirus, Human Astrovirus, and Norovirus (RVA, HAstV, and NoV) are recognized as the major causative agents of acute gastroenteritis in children and adults worldwide. The aim of this study was to determine the prevalence and molecular epidemiology of RVA, HAstV, and NoV in wastewater from three cities in Uruguay. Thirty-six samples from Bella Unión, Salto, and Fray Bentos cities were analyzed using quantitative and qualitative PCR. RVA was the most frequently detected virus (50%), followed by HAstV (39%), NoV GII (36%), and NoV GI (25%). RVA strains were characterized as P[8] and G3 based on the VP4 and VP7 genes, respectively. Among NoV-positive samples, genotypes GI.2, GI.3, GI.5, GI.6, GI.7, GII.2, GII.6, and GII.4 were detected, and only one HAstV genotype (MLB1) was found. Our wastewater-based epidemiological approach provides a snapshot of the overall genetic diversity of these viruses in three cities of the Uruguay River basin during 2017-2018. These findings reinforce the importance of this environmental surveillance tool for monitoring epidemiological trends of enteric viruses circulating in the population, which can be used to guide public health intervention.

Indexed as

Caliciviridae InfectionsGastroenteritisRotavirusAdultChildCitiesFecesGenotypeHumansPhylogenyUruguayWastewaterWastewaterEnteric virusesMolecular characterizationWastewater

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.