Evidence map›Paper›PMID 37872402›Full record

ArticleNature chemical biology2024

An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity.

Sang-Youl Park, Jingde Qiu, Shuang Wei, Francis C Peterson, Jesús Beltrán, Angélica V Medina-Cucurella, Aditya S Vaidya, Zenan Xing, Brian F Volkman, Dmitri A Nusinow and 3 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  3. Review
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  6. Review
  7. Article
  8. The Promise of Synthetic Biology for Redesigning Plant Architecture.International journal of molecular sciences · 2026
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Unusually broad-spectrum small-molecule sensing using a single protein scaffold.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sang-Youl ParkDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA.
Jingde QiuDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA.ORCID 0009-0001-4584-1482
Shuang WeiDepartment of Biochemistry, University of California, Riverside, Riverside, CA, USA.
Francis C PetersonDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, USA.
Jesús BeltránDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA.ORCID 0000-0001-8804-3125
Angélica V Medina-CucurellaDepartment of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, USA.
Aditya S VaidyaDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA.
Zenan XingDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA.
Brian F VolkmanDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-6681-5179
Dmitri A NusinowDonald Danforth Plant Science Center, St. Louis, MO, USA.ORCID 0000-0002-0497-1723
Timothy A WhiteheadDepartment of Chemical and Biological Engineering, University of Colorado, Boulder, CO, USA.
Ian WheeldonInstitute for Integrative Genome Biology, University of California, Riverside, Riverside, CA, USA. wheeldon@ucr.edu.ORCID 0000-0002-3492-7539
Sean R CutlerDepartment of Botany and Plant Sciences, University of California, Riverside, Riverside, CA, USA. cutler@ucr.edu.ORCID 0000-0002-8593-0885

Funding

Rapid and responsive development of "spice" sensors using a novel recognition scaffoldR21DA053496 · NIDA · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI CUTLER, SEAN · 2021 to 2022
$428k
NIDA NIH HHS R21 DA053496
6 · The paper itself

Abstract

Plants sense abscisic acid (ABA) using chemical-induced dimerization (CID) modules, including the receptor PYR1 and HAB1, a phosphatase inhibited by ligand-activated PYR1. This system is unique because of the relative ease with which ligand recognition can be reprogrammed. To expand the PYR1 system, we designed an orthogonal '*' module, which harbors a dimer interface salt bridge; X-ray crystallographic, biochemical and in vivo analyses confirm its orthogonality. We used this module to create PYR1*

Indexed as

ArabidopsisArabidopsis ProteinsAbscisic AcidDimerizationLigandsMembrane Transport ProteinsAbscisic AcidArabidopsis ProteinsLigandsMembrane Transport Proteins

Identifiers

PMID37872402
PMCPMC10746540

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.