Evidence map›Paper›PMID 37870975›Full record

ArticlePlant biotechnology journal2024

An ancient cis-element targeted by Ralstonia solanacearum TALE-like effectors facilitates the development of a promoter trap that could confer broad-spectrum wilt resistance.

Niels Gallas, Xiaoxu Li, Edda von Roepenack-Lahaye, Niklas Schandry, Yuxin Jiang, Dousheng Wu, Thomas Lahaye

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Niels Gallas *Allgemeine Genetik, Zentrum für Molekularbiologie der Pflanzen (ZMBP), Eberhard-Karls-Universität Tübingen, Tübingen, Germany.
Xiaoxu Li *Technology Center, China Tobacco Hunan Industrial Co., Ltd., Changsha, China.ORCID 0000-0002-3778-3964
Edda von Roepenack-LahayeAnalytik-Zentrale Einheiten, Zentrum für Molekularbiologie der Pflanzen (ZMBP), Eberhard-Karls-Universität Tübingen, Tübingen, Germany.
Niklas SchandryGenetics, Department of Biology, Ludwig-Maximilians-University Munich, Martinsried, Germany.
Yuxin JiangHunan Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Hunan University, Changsha, China.
Dousheng WuHunan Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Hunan University, Changsha, China.ORCID 0000-0003-0375-7503
Thomas LahayeAllgemeine Genetik, Zentrum für Molekularbiologie der Pflanzen (ZMBP), Eberhard-Karls-Universität Tübingen, Tübingen, Germany.ORCID 0000-0001-5257-336X
Hunan University · CNUniversity of Tübingen · DEChina Tobacco · CNLudwig-Maximilians-Universität München · DEZero to Three · US

Funding

China National Tobacco Corporation 110202201012(JY-12)Deutsche Forschungsgemeinschaft 442641014Deutsche Forschungsgemeinschaft LA 1338/15 1Deutsche Forschungsgemeinschaft LA 1338/17 1Deutsche Forschungsgemeinschaft TRR356 subproject A05 (491090170)Deutsche Forschungsgemeinschaft TRR356 subproject B03 (491090170)Young Elite Scientists Sponsorship Program by CAST 2021QNRC001
6 · The paper itself

Abstract

Ralstonia solanacearum, a species complex of bacterial plant pathogens that causes bacterial wilt, comprises four phylotypes that evolved when a founder population was split during the continental drift ~180 million years ago. Each phylotype contains strains with RipTAL proteins structurally related to transcription activator-like (TAL) effectors from the bacterial pathogen Xanthomonas. RipTALs have evolved in geographically separated phylotypes and therefore differ in sequence and potentially functionality. Earlier work has shown that phylotype I RipTAL Brg11 targets a 17-nucleotide effector binding element (EBE) and transcriptionally activates the downstream arginine decarboxylase (ADC) gene. The predicted DNA binding preferences of Brg11 and RipTALs from other phylotypes are similar, suggesting that most, if not all, RipTALs target the Brg11-EBE motif and activate downstream ADC genes. Here we show that not only phylotype I RipTAL Brg11 but also RipTALs from other phylotypes activate host genes when preceded by the Brg11-EBE motif. Furthermore, we show that Brg11 and RipTALs from other phylotypes induce the same quantitative changes of ADC-dependent plant metabolites, suggesting that most, if not all, RipTALs induce functionally equivalent changes in host cells. Finally, we report transgenic tobacco lines in which the RipTAL-binding motif Brg11-EBE mediates RipTAL-dependent transcription of the executor-type resistance (R) gene Bs4C from pepper, thereby conferring resistance to RipTAL-delivering R. solanacearum strains. Our results suggest that cell death-inducing executor-type R genes, preceded by the RipTAL-binding motif Brg11-EBE, could be used to genetically engineer broad-spectrum bacterial wilt resistance in crop plants without any apparent fitness penalty.

Indexed as

Ralstonia solanacearumBacterial ProteinsPlant DiseasesPlantsPromoter Regions, GeneticTranscription FactorsBacterial ProteinsTranscription Factorsarginine decarboxylaseexecutor type resistance (R) geneRalstonia injected proteins with similarity to transcription activator-like proteinsRalstonia solanacearumRalstonia solanacearum species complextranscription activator-like effector

Identifiers

PMID37870975
PMCPMC10893940
OpenAlexW4387873794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.