Evidence map›Paper›PMID 37867633›Full record

ArticleJournal of biomedical optics2023

Deep-learning-based cross-modality translation from Stokes image to bright-field contrast.

Shilong Wei, Lu Si, Tongyu Huang, Shan Du, Yue Yao, Yang Dong, Hui Ma

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shilong WeiTsinghua University, Shenzhen International Graduate School, Shenzhen, China.
Lu SiTsinghua University, Shenzhen International Graduate School, Shenzhen, China.
Tongyu HuangTsinghua University, Shenzhen International Graduate School, Shenzhen, China.
Shan DuUniversity of Chinese Academy of Sciences, Shenzhen Hospital, Department of Pathology, Shenzhen, China.
Yue YaoTsinghua University, Shenzhen International Graduate School, Shenzhen, China.
Yang DongTsinghua University, Shenzhen International Graduate School, Shenzhen, China.
Hui MaTsinghua University, Shenzhen International Graduate School, Shenzhen, China.ORCID 0000-0001-9662-0447
Tsinghua University · CNChinese University of Hong Kong, Shenzhen · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Mueller matrix (MM) microscopy has proven to be a powerful tool for probing microstructural characteristics of biological samples down to subwavelength scale. However, in clinical practice, doctors usually rely on bright-field microscopy images of stained tissue slides to identify characteristic features of specific diseases and make accurate diagnosis. Cross-modality translation based on polarization imaging helps to improve the efficiency and stability in analyzing sample properties from different modalities for pathologists. Aim: In this work, we propose a computational image translation technique based on deep learning to enable bright-field microscopy contrast using snapshot Stokes images of stained pathological tissue slides. Taking Stokes images as input instead of MM images allows the translated bright-field images to be unaffected by variations of light source and samples. Approach: We adopted CycleGAN as the translation model to avoid requirements on co-registered image pairs in the training. This method can generate images that are equivalent to the bright-field images with different staining styles on the same region. Results: Pathological slices of liver and breast tissues with hematoxylin and eosin staining and lung tissues with two types of immunohistochemistry staining, i.e., thyroid transcription factor-1 and Ki-67, were used to demonstrate the effectiveness of our method. The output results were evaluated by four image quality assessment methods. Conclusions: By comparing the cross-modality translation performance with MM images, we found that the Stokes images, with the advantages of faster acquisition and independence from light intensity and image registration, can be well translated to bright-field images.

Indexed as

Deep LearningImage Processing, Computer-AssistedLiverLungMicroscopyStaining and Labelingcross-modalitycycle generative adversarial networkpolarizationsnapshot Stokes images

Identifiers

PMID37867633
PMCPMC10587695
OpenAlexW4387820748

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.