Evidence map›Paper›PMID 37867197›Full record

ArticleBMC medical genomics2023

Association between fibrosis-related gene polymorphism and long-term allograft outcome in renal transplant recipients.

Yu Yin, Han Zhang, Li Sun, Qianguang Han, Ming Zheng, Hao Chen, Shuang Fei, Ruoyun Tan, Xiaobing Ju, Zijie Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 1 citations in OpenAlex.

  1. Genome-wide donor-recipient non-HLA mismatch and graft loss.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2025
    Pooled it
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yu Yin *Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Han Zhang *Department of Urology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Li Sun *Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Qianguang HanDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Ming ZhengDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Hao ChenDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Shuang FeiDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Ruoyun TanDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Xiaobing JuDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. doctorjxb73@njmu.edu.cn.
Zijie WangDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. njmuwzj@126.com.
Min GuDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. njmuwzj1990@hotmail.com.
Jiangsu Province Hospital · CNNanjing Medical University · CNSecond Affiliated Hospital of Nanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRenal allograft fibrosis is one of characteristic causes of long-term renal function loss. The purpose of our study is to investigate the association between fibrosis-related genes single nucleotide polymorphism (SNPs) and kidney function in 5 years after kidney transplantation.

methodsA total of 143 recipients were eligible for screening with 5-year follow-up information and SNP sequencing information from blood samples were included in this study. Minor Allele Frequency (MAF) and Hardy-Weinberg Equilibrium (HWE) analysis was conducted to identify tagger single-nucleotide polymorphisms (SNPs) and haplotypes. SNPs associated with the fifth year chronic kidney disease (CKD) staging were screened by SPSS and the "SNPassoc" package in RStudio and used for subsequent prediction model construction.

resultsA total of 275 renal transplant-related SNPs identified after target sequencing analysis. 64 Tagger SNPs were selected, and two SNPs (rs13969 and rs243849) were statistically significant for stage of CKD in 5 years. Finally, a model based on Gender, Age, rs1396, and rs243849 was constructed by multivariate linear regression analysis. Additionally, this model has a good performance in predicting uremia five years after kidney transplantation.

conclusionTwo SNPs (rs13969 and rs243849) were identified to be significantly associated with long-term renal allograft function. Based on this, a prediction model for long-term allograft function was established containing Gender, Age, rs1396, and rs243849. However, an independent cohort should be enrolled to validate the predicting performance.

Indexed as

Kidney TransplantationRenal Insufficiency, ChronicAllograftsFibrosisGenotypeHumansKidneyPolymorphism, Single NucleotideKidney transplantationLong-term outcomeRenal allograft fibrosisSingle-nucleotide polymorphisms (SNPs)

Identifiers

PMID37867197
PMCPMC10591404
OpenAlexW4387855963

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.