Evidence map›Paper›PMID 37864662›Full record

ArticleMolecular biology reports2023

Characterization of complete mitochondrial genome of three Horse flies of the genus Tabanus (Diptera: Tabanidae): comparative analysis.

Arka Mukherjee, Abhishek Ghosh, Kaomud Tyagi, Vikas Kumar, Dhriti Banerjee, Atanu Naskar

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Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Complete Mitogenome sequencing of the fish louseFrontiers in veterinary science · 2024
    Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Arka Mukherjee *Diptera Section, Zoological Survey of India, Kolkata, West Bengal, India.
Abhishek Ghosh *Department of Zoology, University of Calcutta, Kolkata, West Bengal, India.
Kaomud TyagiCentre for DNA Taxonomy, Molecular Systematics Division, Zoological Survey of India, Kolkata, West Bengal, India. kumud.tyagi5@gmail.com.
Vikas KumarCentre for DNA Taxonomy, Molecular Systematics Division, Zoological Survey of India, Kolkata, West Bengal, India. vikaszsi77@gmail.com.
Dhriti BanerjeeDiptera Section, Zoological Survey of India, Kolkata, West Bengal, India.
Atanu NaskarDiptera Section, Zoological Survey of India, Kolkata, West Bengal, India.
Zoological Survey of India · IN

Funding

Ministry of Environment, Forest and Climate Change Core fundingUGC-DAE Consortium for Scientific Research, University Grants Commission DEC18-344658
6 · The paper itself

Abstract

backgroundTabanidae (Horse-Flies or Deer-Flies) are one of the most economically important as well as medically significant haematophagous insect family within the order Diptera. Members of this group are also responsible for the mortality of substantial number of live-stock every year. Due to their pathogen transmission potential and vector competencies makes them an important insect group to study. Till now, mitochondrial genome of 18 species of tabanids were available. METHODS AND

resultsThe complete mitogenome of three species T. diversifrons (15,809 bp), T. rubidus (15,878 bp) and T. tenens (15,872 bp) were generated by Next generation sequencing method. They consist 37 genes, with a positive AT skew and a negative GC skew. The gene order of these three species is similar to the typical gene arrangement of infra-order Tabanomorpha. Most of the tRNAs showed typical clover-leaf secondary structure except trnS1, which lacks the DHU arm. The sliding window analysis showed that the nad4L is the most conserved while atp8, and nad6 are the most variable genes. Moreover, the ratios of non-synonymous to synonymous substitution rates indicated that all PCGs under the purifying selection. Phylogeny revealed Chrysops and Haematopota are monophyletic while species of Hybomitra are nested within the polyphyletic clade of Tabanus. T. diversifrons exhibits sister relationship with Atylotus miser. Two morphologically divergent species T. rubidus and T. tenens are found to be genetically similar and indistinguishable by mitochondrial genome.

conclusionsThe hypervariable genes like atp8 and nad6 can be used as molecular markers for the identification of recently diverged lineages of family Tabanidae. Further, to address uncertainties arising from the two morphological divergent species, it is imperative to obtain data from nuclear gene markers.

Indexed as

DeerDipteraGenome, MitochondrialAnimalsPhylogenyRNA, TransferRNA, TransferMitogenomesPhylogeneticTabanidaeVector

Identifiers

PMID37864662
OpenAlexW4387848824

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.