Evidence map›Paper›PMID 37864007›Full record

ArticleScientific reports2023

A unified approach of detecting phase transition in time-varying complex networks.

Mohamed Ridha Znaidi, Jayson Sia, Scott Ronquist, Indika Rajapakse, Edmond Jonckheere, Paul Bogdan

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mohamed Ridha ZnaidiMing Hsieh Department of Electrical Engineering, University of Southern California, Los Angeles, CA, 90089, USA.
Jayson SiaMing Hsieh Department of Electrical Engineering, University of Southern California, Los Angeles, CA, 90089, USA.ORCID http://orcid.org/0000-0002-5790-2801
Scott RonquistDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, 48109, USA.
Indika RajapakseDepartment of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, 48109, USA.
Edmond JonckheereMing Hsieh Department of Electrical Engineering, University of Southern California, Los Angeles, CA, 90089, USA.
Paul BogdanMing Hsieh Department of Electrical Engineering, University of Southern California, Los Angeles, CA, 90089, USA. pbogdan@usc.edu.

Funding

National Science Foundation (NSF) 1453860United States Department of Defense | Defense Advanced Research Projects Agency (DARPA) N66001-17-1-4044United States Department of Defense | Defense Advanced Research Projects Agency (DARPA) W911NF-17-1-0076
6 · The paper itself

Abstract

Deciphering the non-trivial interactions and mechanisms driving the evolution of time-varying complex networks (TVCNs) plays a crucial role in designing optimal control strategies for such networks or enhancing their causal predictive capabilities. In this paper, we advance the science of TVCNs by providing a mathematical framework through which we can gauge how local changes within a complex weighted network affect its global properties. More precisely, we focus on unraveling unknown geometric properties of a network and determine its implications on detecting phase transitions within the dynamics of a TVCN. In this vein, we aim at elaborating a novel and unified approach that can be used to depict the relationship between local interactions in a complex network and its global kinetics. We propose a geometric-inspired framework to characterize the network's state and detect a phase transition between different states, to infer the TVCN's dynamics. A phase of a TVCN is determined by its Forman-Ricci curvature property. Numerical experiments show the usefulness of the proposed curvature formalism to detect the transition between phases within artificially generated networks. Furthermore, we demonstrate the effectiveness of the proposed framework in identifying the phase transition phenomena governing the training and learning processes of artificial neural networks. Moreover, we exploit this approach to investigate the phase transition phenomena in cellular re-programming by interpreting the dynamics of Hi-C matrices as TVCNs and observing singularity trends in the curvature network entropy. Finally, we demonstrate that this curvature formalism can detect a political change. Specifically, our framework can be applied to the US Senate data to detect a political change in the United States of America after the 1994 election, as discussed by political scientists.

Identifiers

PMID37864007
PMCPMC10589276

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.