Evidence map›Paper›PMID 37863879›Full record

ArticleNature communications2023

Circular single-stranded DNA as switchable vector for gene expression in mammalian cells.

Linlin Tang, Zhijin Tian, Jin Cheng, Yijing Zhang, Yongxiu Song, Yan Liu, Jinghao Wang, Pengfei Zhang, Yonggang Ke, Friedrich C Simmel and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  8. DNA Origami and Its Applications in Synthetic Biology.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Linlin Tang *Institute of Nano Biomedicine and Engineering, Department of Instrument Science and Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, 200240, Shanghai, China.
Zhijin Tian *Hangzhou Institute of Medicine, Chinese Academy of Sciences, 310022, Hangzhou, Zhejiang, China.
Jin Cheng *Institute of Nano Biomedicine and Engineering, Department of Instrument Science and Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, 200240, Shanghai, China.
Yijing ZhangHangzhou Institute of Medicine, Chinese Academy of Sciences, 310022, Hangzhou, Zhejiang, China.
Yongxiu SongHangzhou Institute of Medicine, Chinese Academy of Sciences, 310022, Hangzhou, Zhejiang, China.
Yan LiuInstitute of Nano Biomedicine and Engineering, Department of Instrument Science and Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, 200240, Shanghai, China.
Jinghao WangHangzhou Institute of Medicine, Chinese Academy of Sciences, 310022, Hangzhou, Zhejiang, China.
Pengfei ZhangHangzhou Institute of Medicine, Chinese Academy of Sciences, 310022, Hangzhou, Zhejiang, China.
Yonggang KeWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, 30322, USA. yonggang.ke@emory.edu.ORCID 0000-0003-1673-2153
Friedrich C SimmelPhysics Department, Technische Universität München, Garching, Germany. simmel@tum.de.ORCID 0000-0003-3829-3446
Jie SongInstitute of Nano Biomedicine and Engineering, Department of Instrument Science and Engineering, School of Electronic Information and Electrical Engineering, Shanghai Jiao Tong University, 200240, Shanghai, China. sjie@sjtu.edu.cn.ORCID 0000-0002-4711-6014
Shanghai Jiao Tong University · CNChinese Academy of Sciences · CNUniversity of Science and Technology of China · CNGeorgia Institute of Technology · USTechnical University of Munich · DETianjin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Synthetic gene networks in mammalian cells are currently limited to either protein-based transcription factors or RNA-based regulators. Here, we demonstrate a regulatory approach based on circular single-stranded DNA (Css DNA), which can be used as an efficient expression vector with switchable activity, enabling gene regulation in mammalian cells. The Css DNA is transformed into its double-stranded form via DNA replication and used as vectors encoding a variety of different proteins in a wide range of cell lines as well as in mice. The rich repository of DNA nanotechnology allows to use sort single-stranded DNA effectors to fold Css DNA into DNA nanostructures of different complexity, leading the gene expression to programmable inhibition and subsequently re-activation via toehold-mediated strand displacement. The regulatory strategy from Css DNA can thus expand the molecular toolbox for the realization of synthetic regulatory networks with potential applications in genetic diagnosis and gene therapy.

Indexed as

DNADNA, Single-StrandedAnimalsDNA-Binding ProteinsDNA ReplicationGene ExpressionMammalsMiceDNADNA-Binding ProteinsDNA, Single-Stranded

Identifiers

PMID37863879
PMCPMC10589306
OpenAlexW4387806976

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.