Evidence map›Paper›PMID 37862096›Full record

ArticleeLife2023

The Arabidopsis SHORTROOT network coordinates shoot apical meristem development with auxin-dependent lateral organ initiation.

Elmehdi Bahafid, Imke Bradtmöller, Ann M Thies, Thi T O N Nguyen, Crisanto Gutierrez, Bénédicte Desvoyes, Yvonne Stahl, Ikram Blilou, Rüdiger G W Simon

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Different Dynamics:Biology · 2026
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  15. GRAS transcription factors regulate cell division planes in moss overriding the default rule.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Elmehdi BahafidInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.ORCID 0000-0002-2678-6246
Imke BradtmöllerInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.
Ann M ThiesInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.
Thi T O N NguyenInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.
Crisanto GutierrezCentro de Biologia Molecular Severo Ochoa, CSIC-UAM, Cantoblanco, Madrid, Spain.ORCID 0000-0001-8905-8222
Bénédicte DesvoyesCentro de Biologia Molecular Severo Ochoa, CSIC-UAM, Cantoblanco, Madrid, Spain.
Yvonne StahlInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.
Ikram BlilouLaboratory of Plant Cell and Developmental Biology, Division of Biological and Environmental Sciences and Engineering, 4700 King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Rüdiger G W SimonInstitute for Developmental Genetics, Heinrich Heine University, Düsseldorf, Germany.ORCID 0000-0002-1317-7716
Heinrich Heine University Düsseldorf · DECentro de Biología Molecular Severo Ochoa · ESKing Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants produce new organs post-embryonically throughout their entire life cycle. This is due to stem cells present in the shoot and root apical meristems, the SAM and RAM, respectively. In the SAM, stem cells are located in the central zone where they divide slowly. Stem cell daughters are displaced laterally and enter the peripheral zone, where their mitotic activity increases and lateral organ primordia are formed. How the spatial arrangement of these different domains is initiated and controlled during SAM growth and development, and how sites of lateral organ primordia are determined in the peripheral zone is not yet completely understood. We found that the SHORTROOT (SHR) transcription factor together with its target transcription factors SCARECROW (SCR), SCARECROW-LIKE23 (SCL23) and JACKDAW (JKD), promotes formation of lateral organs and controls shoot meristem size. SHR, SCR, SCL23, and JKD are expressed in distinct, but partially overlapping patterns in the SAM. They can physically interact and activate expression of key cell cycle regulators such as

Indexed as

ArabidopsisArabidopsis ProteinsCyclinsGene Expression Regulation, PlantHomeodomain ProteinsIndoleacetic AcidsMeristemTranscription FactorsArabidopsis ProteinsCYCD6;1 protein, ArabidopsisCyclinsHomeodomain ProteinsIndoleacetic AcidsTranscription FactorsA. thalianadevelopmental biologymeristemorgan formationpatterningplant biologysignallingstem cellstranscription factor

Identifiers

PMID37862096
PMCPMC10642969
OpenAlexW4387798719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.