Evidence map›Paper›PMID 37858505›Full record

ArticleAcademic radiology2024

Deep Learning-Based Interpretable AI for Prostate T2W MRI Quality Evaluation.

Mason J Belue, Yan Mee Law, Jamie Marko, Evrim Turkbey, Ashkan Malayeri, Enis C Yilmaz, Yue Lin, Latrice Johnson, Katie M Merriman, Nathan S Lay and 5 more

Abstract read
In one paragraph

Article in Academic radiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Mason J BelueMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Yan Mee LawDepartment of Radiology, Singapore General Hospital, Singapore (Y.M.L.).
Jamie MarkoDepartment of Radiology, Johns Hopkins University, Baltimore, Maryland, USA (J.M.).
Evrim TurkbeyDepartment of Radiology, Clinical Center, National Institutes of Health, Bethesda, Maryland, USA (E.T., A.M., B.J.W.).
Ashkan MalayeriDepartment of Radiology, Clinical Center, National Institutes of Health, Bethesda, Maryland, USA (E.T., A.M., B.J.W.).
Enis C YilmazMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Yue LinMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Latrice JohnsonMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Katie M MerrimanMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Nathan S LayMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Bradford J WoodDepartment of Radiology, Clinical Center, National Institutes of Health, Bethesda, Maryland, USA (E.T., A.M., B.J.W.); Center for Interventional Oncology, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (B.J.W.).
Peter A PintoUrologic Oncology Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (P.A.P.).
Peter L ChoykeMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Stephanie A HarmonMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.).
Baris TurkbeyMolecular Imaging Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA (M.J.B., E.C.Y., Y.L., L.J., K.M.M, N.S.L., P.L.C., S.A.H., B.T.). Electronic address: turkbeyi@mail.nih.gov.

Funding

Prostate Cancer ImagingZIABC010655 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CHOYKE, PETER L · 2009 to 2025
$49.2M
Center for Interventional OncologyZIDBC011242 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WOOD, BRADFORD J · 2009 to 2025
$18.7M
Prostate SectionZIABC011081 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PINTO, PETER · 2009 to 2025
$15.2M
Imaging, image guided biopsy and treatment of prostate cancerZIABC012062 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TÜRKBEY, BARIS · 2021 to 2025
$1.3M
Development of COVID-19 Imaging Tools with Artificial IntelligenceZIABC011936 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WOOD, BRADFORD J · 2020 to 2025
$1.2M
Interventional OncologyZIACL040015 · CLC · CLINICAL CENTER · PI WOOD, BRADFORD · 2009 to 2025
$0k
Artificial Intelligence with Chest Imaging in COVID-19 and Isolation and Ventilator Devices for COVID-19ZIACL090072 · CLC · CLINICAL CENTER · PI WOOD, BRADFORD · 2020 to 2025
$0k
Intramural NIH HHS ZIA BC012062
6 · The paper itself

Abstract

RATIONALE AND

objectivesProstate MRI quality is essential in guiding prostate biopsies. However, assessment of MRI quality is subjective with variation. Quality degradation sources exert varying impacts based on the sequence under consideration, such as T2W versus DWI. As a result, employing sequence-specific techniques for quality assessment could yield more advantageous outcomes. This study aims to develop an AI tool that offers a more consistent evaluation of T2W prostate MRI quality, efficiently identifying suboptimal scans while minimizing user bias. MATERIALS AND

methodsThis retrospective study included 1046 patients from three cohorts (ProstateX [n = 347], All-comer in-house [n = 602], enriched bad-quality MRI in-house [n = 97]) scanned between January 2011 and May 2022. An expert reader assigned T2W MRIs a quality score. A train-validation-test split of 70:15:15 was applied, ensuring equal distribution of MRI scanners and protocols across all partitions. T2W quality AI classification model was based on 3D DenseNet121 architecture using MONAI framework. In addition to multiclassification, binary classification was utilized (Classes 0/1 vs. 2). A score of 0 was given to scans considered non-diagnostic or unusable, a score of 1 was given to those with acceptable diagnostic quality with some usability but with some quality distortions present, and a score of 2 was given to those considered optimal diagnostic quality and usability. Partial occlusion sensitivity maps were generated for anatomical correlation. Three body radiologists assessed reproducibility within a subgroup of 60 test cases using weighted Cohen Kappa.

resultsThe best validation multiclass accuracy of 77.1% (121/157) was achieved during training. In the test dataset, multiclassification accuracy was 73.9% (116/157), whereas binary accuracy was 84.7% (133/157). Sub-class sensitivity for binary quality distortion classification for class 0 was 100% (18/18), and sub-class specificity for T2W classification of absence/minimal quality distortions for class 2 was 90.5% (95/105). All three readers showed moderate to substantial agreement with ground truth (R1-R3 κ = 0.588, κ = 0.649, κ = 0.487, respectively), moderate to substantial agreement with each other (R1-R2 κ = 0.599, R1-R3 κ = 0.612, R2-R3 κ = 0.685), fair to moderate agreement with AI (R1-R3 κ = 0.445, κ = 0.410, κ = 0.292, respectively). AI showed substantial agreement with ground truth (κ = 0.704). 3D quality heatmap evaluation revealed that the most critical non-diagnostic quality imaging features from an AI perspective related to obscuration of the rectoprostatic space (94.4%, 17/18).

conclusionThe 3D AI model can assess T2W prostate MRI quality with moderate accuracy and translate whole sequence-level classification labels into 3D voxel-level quality heatmaps for interpretation. Image quality has a significant downstream impact on ruling out clinically significant cancers. AI may be able to help with reproducible identification of MRI sequences requiring re-acquisition with explainability.

Indexed as

Deep LearningProstatic NeoplasmsHumansMagnetic Resonance ImagingMaleProstateReproducibility of ResultsRetrospective Studies

Identifiers

PMID37858505
PMCPMC11015987

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