Evidence map›Paper›PMID 37857919›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2023

Country-wide expansion of a VIM-1 carbapenemase-producing Klebsiella oxytoca ST145 lineage in Poland, 2009-2019.

M Biedrzycka, P Urbanowicz, D Żabicka, W Hryniewicz, M Gniadkowski, R Izdebski

Open access · hybridAbstract read
In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Genomic Investigation of Bacterial Co-Infection in Southern Pudu (Animals : an open access journal from MDPI · 2025
    Article
  4. NDM- or VIM-producing Citrobacter spp. in Poland, 2011-19: high genetic diversity with broader representation of ST8, ST18 and ST22 global clones.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  5. Multiple regional outbreaks caused by global and local VIM-producing Klebsiella pneumoniae clones in Poland, 2006-2019.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  6. Virulence profile of carbapenem-resistantMicrobiology spectrum · 2025
    Article
  7. Article
  8. Genome assembly ofFrontiers in microbiology · 2025
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

M BiedrzyckaDepartment of Molecular Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland.ORCID http://orcid.org/0000-0002-9590-658X
P UrbanowiczDepartment of Molecular Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland.ORCID http://orcid.org/0000-0001-8622-706X
D ŻabickaDepartment of Epidemiology and Clinical Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland.ORCID http://orcid.org/0000-0001-9386-8885
W HryniewiczDepartment of Epidemiology and Clinical Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland.ORCID http://orcid.org/0000-0002-3651-9790
M GniadkowskiDepartment of Molecular Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland.ORCID http://orcid.org/0000-0003-2981-4721
R IzdebskiDepartment of Molecular Microbiology, National Medicines Institute, Chełmska 30/34, 00-725, Warsaw, Poland. r.izdebski@nil.gov.pl.ORCID http://orcid.org/0000-0003-1195-9471
Narodowy Instytut Leków · PL

Funding

Ministerstwo Edukacji i Nauki SPUB MIKROBANKNarodowe Centrum Nauki 2019/33/B/NZ7/01461
6 · The paper itself

Abstract

purposeTo elucidate the role of the Klebsiella oxytoca species complex (KoSC) in epidemiology of VIM-type MBL-producing Enterobacterales in Poland.

methodsThe study comprised all 106 VIM-positive KoSC isolates collected by the Polish National Reference Centre for Susceptibility Testing during 2009-2019 from 60 institutions in 35 towns. All isolates were sequenced by Illumina MiSeq, followed by MinION sequencing of selected organisms. Genomes were subjected to bioinformatic analysis, addressing taxonomy, clonality, phylogeny and structural characterisation of key resistance determinants within their chromosomal and plasmidic loci.

resultsAmong five species identified, K. oxytoca was predominant (n = 92), followed by Klebsiella michiganensis (n = 11). MLST distinguished 18 STs, with the most prevalent Klebsiella oxytoca ST145 (n = 83). The clone segregated a lineage with the In237-like integron [bla

conclusionKoSC has been one of the major VIM producers in Poland, owing largely to clonal expansion of the specific K. oxytoca-In237-like lineage. Its apparently enhanced epidemic potential may create a danger on international scale.

Indexed as

Carbapenem-Resistant EnterobacteriaceaeKlebsiella oxytocaAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesHumansKlebsiella pneumoniaeMicrobial Sensitivity TestsMultilocus Sequence TypingPlasmidsPolandAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasescarbapenemaseEnterobacteralesKlebsiella oxytoca species complexKoSCPolandST145VIM

Identifiers

PMID37857919
PMCPMC10651708
OpenAlexW4387782475

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.