Evidence map›Paper›PMID 37857601›Full record

ArticleNature communications2023

Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field.

Jugurta Bouidghaghen, Laurence Moreau, Katia Beauchêne, Romain Chapuis, Nathalie Mangel, Llorenç Cabrera-Bosquet, Claude Welcker, Matthieu Bogard, François Tardieu

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. High-dimensional multi-omics measured in controlled conditions are useful for maize platform and field trait predictions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jugurta BouidghaghenLEPSE, Univ Montpellier, INRAE, Montpellier, France.ORCID http://orcid.org/0009-0001-0071-210X
Laurence MoreauGQE-Le Moulon, INRAE, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Gif-sur-Yvette, France.
Katia BeauchêneARVALIS, 45 Voie Romaine, Ouzouer-Le-Marché, Beauce La Romaine, France.
Romain ChapuisDIASCOPE, Univ Montpellier, INRAE, Montpellier, France.
Nathalie MangelARVALIS, Station de recherche et d'expérimentation, Boigneville, France.
Llorenç Cabrera-BosquetLEPSE, Univ Montpellier, INRAE, Montpellier, France.
Claude WelckerLEPSE, Univ Montpellier, INRAE, Montpellier, France.ORCID http://orcid.org/0000-0002-8275-1259
Matthieu BogardARVALIS, Chemin de la côte vieille, Baziège, France.ORCID http://orcid.org/0000-0003-1349-8330
François TardieuLEPSE, Univ Montpellier, INRAE, Montpellier, France. francois.tardieu@inrae.fr.ORCID http://orcid.org/0000-0002-7287-0094

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breeding for resilience to climate change requires considering adaptive traits such as plant architecture, stomatal conductance and growth, beyond the current selection for yield. Robotized indoor phenotyping allows measuring such traits at high throughput for speed breeding, but is often considered as non-relevant for field conditions. Here, we show that maize adaptive traits can be inferred in different fields, based on genotypic values obtained indoor and on environmental conditions in each considered field. The modelling of environmental effects allows translation from indoor to fields, but also from one field to another field. Furthermore, genotypic values of considered traits match between indoor and field conditions. Genomic prediction results in adequate ranking of genotypes for the tested traits, although with lesser precision for elite varieties presenting reduced phenotypic variability. Hence, it distinguishes genotypes with high or low values for adaptive traits, conferring either spender or conservative strategies for water use under future climates.

Indexed as

GenomicsPlant BreedingGenome, PlantGenotypePhenotype

Identifiers

PMID37857601
PMCPMC10587076

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.