Evidence map›Paper›PMID 37856502›Full record

ArticlePloS one2023

Identification of preclinical dementia according to ATN classification for stratified trial recruitment: A machine learning approach.

Ivan Koychev, Evgeniy Marinov, Simon Young, Sophia Lazarova, Denitsa Grigorova, Dean Palejev

Abstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ivan KoychevDepartment of Psychiatry, University of Oxford, Oxford, United Kingdom.ORCID 0000-0001-6813-8493
Evgeniy MarinovBig Data for Smart Society (GATE) Institute, Sofia University, Sofia, Bulgaria.
Simon YoungDepartment of Psychiatry, University of Oxford, Oxford, United Kingdom.
Sophia LazarovaBig Data for Smart Society (GATE) Institute, Sofia University, Sofia, Bulgaria.
Denitsa GrigorovaBig Data for Smart Society (GATE) Institute, Sofia University, Sofia, Bulgaria.
Dean PalejevBig Data for Smart Society (GATE) Institute, Sofia University, Sofia, Bulgaria.

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
NIA NIH HHS U01 AG024904
6 · The paper itself

Abstract

introductionThe Amyloid/Tau/Neurodegeneration (ATN) framework was proposed to identify the preclinical biological state of Alzheimer's disease (AD). We investigated whether ATN phenotype can be predicted using routinely collected research cohort data.

methods927 EPAD LCS cohort participants free of dementia or Mild Cognitive Impairment were separated into 5 ATN categories. We used machine learning (ML) methods to identify a set of significant features separating each neurodegeneration-related group from controls (A-T-(N)-). Random Forest and linear-kernel SVM with stratified 5-fold cross validations were used to optimize model whose performance was then tested in the ADNI database.

resultsOur optimal results outperformed ATN cross-validated logistic regression models by between 2.2% and 8.3%. The optimal feature sets were not consistent across the 4 models with the AD pathologic change vs controls set differing the most from the rest. Because of that we have identified a subset of 10 features that yield results very close or identical to the optimal. DISCUSSION: Our study demonstrates the gains offered by ML in generating ATN risk prediction over logistic regression models among pre-dementia individuals.

Indexed as

Alzheimer DiseaseCognitive DysfunctionAmyloid beta-PeptidesAmyloidogenic ProteinsBiomarkersHumansMachine Learningtau ProteinsAmyloid beta-PeptidesAmyloidogenic ProteinsBiomarkerstau Proteins

Identifiers

PMID37856502
PMCPMC10586674

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.