Evidence map›Paper›PMID 37853100›Full record

ArticleCommunications biology2023

Genes possibly related to symbiosis in early life stages of Acropora tenuis inoculated with Symbiodinium microadriaticum.

Yuki Yoshioka, Yi-Ling Chiu, Taiga Uchida, Hiroshi Yamashita, Go Suzuki, Chuya Shinzato

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yuki YoshiokaAtmosphere and Ocean Research Institute (AORI), The University of Tokyo, Kashiwa, Chiba, Japan. y.yoshioka@oist.jp.ORCID http://orcid.org/0000-0001-6348-4629
Yi-Ling ChiuAtmosphere and Ocean Research Institute (AORI), The University of Tokyo, Kashiwa, Chiba, Japan.
Taiga UchidaAtmosphere and Ocean Research Institute (AORI), The University of Tokyo, Kashiwa, Chiba, Japan.ORCID http://orcid.org/0000-0002-3776-7032
Hiroshi YamashitaFisheries Technology Institute, Japan Fisheries Research and Education Agency, Ishigaki, Okinawa, Japan.
Go SuzukiFisheries Technology Institute, Japan Fisheries Research and Education Agency, Ishigaki, Okinawa, Japan.
Chuya ShinzatoAtmosphere and Ocean Research Institute (AORI), The University of Tokyo, Kashiwa, Chiba, Japan. c.shinzato@aori.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0001-7843-3381
The University of Tokyo · JPKyorin University · JPOkinawa Institute of Science and Technology Graduate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to the ecological importance of mutualism between reef-building corals and symbiotic algae (Family Symbiodiniaceae), various transcriptomic studies on coral-algal symbiosis have been performed; however, molecular mechanisms, especially genes essential to initiate and maintain these symbioses remain unknown. We investigated transcriptomic responses of Acropora tenuis to inoculation with the native algal symbiont, Symbiodinium microadriaticum, during early life stages, and identified possible symbiosis-related genes. Genes involved in immune regulation, protection against oxidative stress, and metabolic interactions between partners are particularly important for symbiosis during Acropora early life stages. In addition, molecular phylogenetic analysis revealed that some possible symbiosis-related genes originated by gene duplication in the Acropora lineage, suggesting that gene duplication may have been the driving force to establish stable mutualism in Acropora, and that symbiotic molecular mechanisms may vary among coral lineages.

Indexed as

AnthozoaSymbiosisAnimalsGene Expression ProfilingPhylogenyTranscriptome

Identifiers

PMID37853100
PMCPMC10584924
OpenAlexW4387742423

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.