Evidence map›Paper›PMID 37850645›Full record

ArticleNucleic acids research2023

The SAP domain of Ku facilitates its efficient loading onto DNA ends.

Jaroslav Fulneček, Eva Klimentová, Albert Cairo, Sona Valuchova Bukovcakova, Panagiotis Alexiou, Zbynek Prokop, Karel Riha

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jaroslav FulnečekCEITEC Masaryk University, Brno, Czech Republic.
Eva KlimentováCEITEC Masaryk University, Brno, Czech Republic.
Albert CairoCEITEC Masaryk University, Brno, Czech Republic.
Sona Valuchova BukovcakovaCEITEC Masaryk University, Brno, Czech Republic.
Panagiotis AlexiouCEITEC Masaryk University, Brno, Czech Republic.
Zbynek ProkopLoschmidt Laboratories, Department of Experimental Biology and RECETOX, Masaryk University, Brno, Czech Republic.
Karel RihaCEITEC Masaryk University, Brno, Czech Republic.ORCID 0000-0002-6124-0118
Central European Institute of Technology – Masaryk University · CZMasaryk University · CZ

Funding

Czech Ministry of Education, Youth and Sports CZ.02.1.01/0.0/0.0/17_043/0009632Grantová Agentura České Republiky 19-21961SHORIZON EUROPE European Innovation Council TEAMING 857560Masaryk UniversityMEYS LM2023042
6 · The paper itself

Abstract

The evolutionarily conserved DNA repair complex Ku serves as the primary sensor of free DNA ends in eukaryotic cells. Its rapid association with DNA ends is crucial for several cellular processes, including non-homologous end joining (NHEJ) DNA repair and telomere protection. In this study, we conducted a transient kinetic analysis to investigate the impact of the SAP domain on individual phases of the Ku-DNA interaction. Specifically, we examined the initial binding, the subsequent docking of Ku onto DNA, and sliding of Ku along DNA. Our findings revealed that the C-terminal SAP domain of Ku70 facilitates the initial phases of the Ku-DNA interaction but does not affect the sliding process. This suggests that the SAP domain may either establish the first interactions with DNA, or stabilize these initial interactions during loading. To assess the biological role of the SAP domain, we generated Arabidopsis plants expressing Ku lacking the SAP domain. Intriguingly, despite the decreased efficiency of the ΔSAP Ku complex in loading onto DNA, the mutant plants exhibited full proficiency in classical NHEJ and telomere maintenance. This indicates that the speed with which Ku loads onto telomeres or DNA double-strand breaks is not the decisive factor in stabilizing these DNA structures.

Indexed as

DNA RepairKu AutoantigenDNADNA End-Joining RepairKineticsDNAKu Autoantigen

Identifiers

PMID37850645
PMCPMC10681742
OpenAlexW4387729491

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.