Evidence map›Paper›PMID 37849899›Full record

ReviewBiodesign research2020

Plant Biosystems Design Research Roadmap 1.0.

Xiaohan Yang, June I Medford, Kasey Markel, Patrick M Shih, Henrique C De Paoli, Cong T Trinh, Alistair J McCormick, Raphael Ployet, Steven G Hussey, Alexander A Myburg and 26 more

Abstract readReview
In one paragraph

Review in Biodesign research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Transcriptomic Analysis of the CAM SpeciesPlants (Basel, Switzerland) · 2024
    Article
  8. Synthetic biology in plants.Plant biotechnology (Tokyo, Japan) · 2024
    Article
  9. Engineering Crassulacean Acid Metabolism in CCold Spring Harbor perspectives in biology · 2024
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Plant Biology Research: What Is Next?Frontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Xiaohan YangBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0001-5207-4210
June I MedfordDepartment of Biology, Colorado State University, Fort Collins, CO 80523, USA.
Kasey MarkelDepartment of Plant Biology, University of California, Davis, Davis, CA, USA.
Patrick M ShihDepartment of Plant Biology, University of California, Davis, Davis, CA, USA.ORCID https://orcid.org/0000-0002-2119-3345
Henrique C De PaoliDepartment of Biodesign, Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Cong T TrinhThe Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Alistair J McCormickSynthSys and Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, UK.
Raphael PloyetDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa.
Steven G HusseyDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa.
Alexander A MyburgDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa.
Poul Erik JensenDepartment of Food Science, University of Copenhagen, Rolighedsvej 26, DK-1858, Frederiksberg, Copenhagen, Denmark.
Md Mahmudul HassanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Jin ZhangBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Wellington MucheroBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Udaya C KalluriBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0002-5963-8370
Hengfu YinState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang 311400, China.
Renying ZhuoState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang 311400, China.
Paul E AbrahamBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0003-2685-9123
Jin-Gui ChenBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0002-1752-4201
David J WestonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Yinong YangDepartment of Plant Pathology and Environmental Microbiology and the Huck Institute of the Life Sciences, The Pennsylvania State University, University Park, PA 16802, USA.
Degao LiuDepartment of Genetics, Cell Biology and Development, Center for Precision Plant Genomics and Center for Genome Engineering, University of Minnesota, Saint Paul, MN 55108, USA.
Yi LiDepartment of Plant Science and Landscape Architecture, University of Connecticut, Storrs, CT 06269, USA.
Jessy LabbeBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0003-0368-2054
Bing YangDivision of Plant Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO, USA.
Jun Hyung LeeBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Robert W CottinghamBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Stanton MartinBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Mengzhu LuState Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, Zhejiang 311300, China.
Timothy J TschaplinskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Guoliang YuanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0002-6562-8769
Haiwei LuBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0003-3063-6555
Priya RanjanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Julie C MitchellBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Stan D WullschlegerEnvironmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID https://orcid.org/0000-0002-9869-0446
Gerald A TuskanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human life intimately depends on plants for food, biomaterials, health, energy, and a sustainable environment. Various plants have been genetically improved mostly through breeding, along with limited modification via genetic engineering, yet they are still not able to meet the ever-increasing needs, in terms of both quantity and quality, resulting from the rapid increase in world population and expected standards of living. A step change that may address these challenges would be to expand the potential of plants using biosystems design approaches. This represents a shift in plant science research from relatively simple trial-and-error approaches to innovative strategies based on predictive models of biological systems. Plant biosystems design seeks to accelerate plant genetic improvement using genome editing and genetic circuit engineering or create novel plant systems through

Identifiers

PMID37849899
PMCPMC10521729

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.